Strain Fitness in Shewanella oneidensis MR-1 around SO3829

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,978,682	+		SO3828	0.32	-2.1
3,978,690	-		SO3828	0.32	+0.9
3,978,690	-		SO3828	0.32	+1.1
3,978,690	-		SO3828	0.32	-1.4
3,978,710	-		SO3828	0.34	-0.7
3,978,715	-		SO3828	0.34	-0.6
3,978,804	-		SO3828	0.42	+0.6
3,978,872	+		SO3828	0.47	-0.8
3,979,133	-		SO3828	0.68	-1.2
3,979,244	-		SO3828	0.77	-2.2
3,979,244	-		SO3828	0.77	+2.4
3,979,338	+		SO3828	0.84	-0.4
3,979,356	+		SO3828	0.86	-0.8
3,979,356	+		SO3828	0.86	+0.1
3,979,356	+		SO3828	0.86	-0.2
3,979,356	+		SO3828	0.86	+0.7
3,979,356	+		SO3828	0.86	-0.2
3,979,356	+		SO3828	0.86	+0.9
3,979,364	-		SO3828	0.86	-1.2
3,979,364	-		SO3828	0.86	+0.1
3,979,364	-		SO3828	0.86	+0.9
3,979,423	-				+0.4
3,979,528	+				-1.4
3,979,536	+				-2.3
3,979,536	-				+0.6
3,979,547	+				-0.1
3,979,555	-				+0.8
3,979,555	-				-0.9
3,979,751	-				-4.1
3,979,761	-		SO3829	0.11	-2.2
3,979,795	-		SO3829	0.15	-2.4
3,979,850	-		SO3829	0.22	-2.6
3,979,927	-		SO3829	0.32	-4.0
3,980,308	-		SO3829	0.80	-3.4
3,980,443	-				-0.6
3,980,680	+		SO3830	0.52	-2.2
3,980,680	-		SO3830	0.52	-4.1
3,980,727	-		SO3830	0.63	-2.6
3,980,773	-		SO3830	0.74	-1.8
3,980,800	-		SO3830	0.80	-2.0
3,980,841	-				-0.8
3,980,890	+				-3.2
3,980,898	-				-1.9
3,981,187	+		SO3831	0.51	-2.3
3,981,229	+		SO3831	0.61	+0.8
3,981,317	+		SO3831	0.82	+0.0
3,981,350	-				-1.6
3,981,384	+				-2.3
3,981,415	+				+0.0
3,981,415	+				+0.5
3,981,446	+				+1.2