Strain Fitness in Shewanella oneidensis MR-1 around SO3603

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,764,351	+	cysA-1	SO3602	0.34	-0.0
3,764,364	-	cysA-1	SO3602	0.35	-0.0
3,764,364	-	cysA-1	SO3602	0.35	-1.3
3,764,371	+	cysA-1	SO3602	0.36	-0.5
3,764,379	-	cysA-1	SO3602	0.37	+0.0
3,764,379	-	cysA-1	SO3602	0.37	+0.6
3,764,382	+	cysA-1	SO3602	0.37	-1.3
3,764,466	+	cysA-1	SO3602	0.44	+0.0
3,764,481	-	cysA-1	SO3602	0.46	-0.9
3,764,544	-	cysA-1	SO3602	0.51	-1.3
3,764,569	-	cysA-1	SO3602	0.53	+0.5
3,764,570	-	cysA-1	SO3602	0.54	-1.5
3,764,582	-	cysA-1	SO3602	0.55	-1.2
3,764,604	+	cysA-1	SO3602	0.57	-0.7
3,764,632	+	cysA-1	SO3602	0.59	+0.7
3,764,632	+	cysA-1	SO3602	0.59	+0.3
3,764,719	+	cysA-1	SO3602	0.67	+1.0
3,764,818	+	cysA-1	SO3602	0.76	-1.3
3,764,991	-				+1.6
3,764,991	-				+1.0
3,765,082	-				-1.9
3,765,104	+				-2.1
3,765,104	+				+0.3
3,765,181	-				+2.2
3,765,204	+				+1.7
3,765,264	+				+1.2
3,765,277	-				+0.5
3,765,285	-				-0.9
3,765,350	-		SO3603	0.12	-0.3
3,765,461	+		SO3603	0.21	+0.4
3,765,476	+		SO3603	0.23	-1.2
3,765,527	-		SO3603	0.27	-2.7
3,765,527	-		SO3603	0.27	-1.1
3,765,616	+		SO3603	0.35	-2.5
3,765,623	+		SO3603	0.36	-0.6
3,765,688	-		SO3603	0.41	-1.7
3,765,749	+		SO3603	0.47	+0.6
3,766,015	+		SO3603	0.70	+0.1
3,766,023	-		SO3603	0.71	-1.0
3,766,033	-		SO3603	0.72	-2.3
3,766,074	-		SO3603	0.75	+1.3
3,766,122	-		SO3603	0.80	-1.0
3,766,149	-		SO3603	0.82	-1.7
3,766,178	-		SO3603	0.85	+0.6
3,766,244	+				-0.8
3,766,258	+				+1.2
3,766,258	+				+0.4
3,766,258	+				+0.3
3,766,266	-				-0.8
3,766,266	-				-1.9
3,766,306	-				-0.3
3,766,308	-				+0.4