Strain Fitness in Shewanella oneidensis MR-1 around SO3317

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,468,370	+		SO3316	0.20	+1.3
3,468,446	-		SO3316	0.27	-1.1
3,468,453	+		SO3316	0.27	+1.2
3,468,516	-		SO3316	0.33	-2.4
3,468,550	+		SO3316	0.36	-2.8
3,468,558	-		SO3316	0.37	-1.1
3,468,623	-		SO3316	0.43	-0.5
3,468,709	+		SO3316	0.51	+0.5
3,468,764	+		SO3316	0.56	+0.6
3,468,795	-		SO3316	0.59	+0.7
3,468,935	+		SO3316	0.71	+0.6
3,468,943	-		SO3316	0.72	-1.8
3,469,093	+		SO3316	0.86	+0.2
3,469,205	+				-0.1
3,469,250	-				-0.3
3,469,272	+				-0.9
3,469,353	+				-0.7
3,469,357	-				-0.3
3,469,471	+				-1.8
3,469,475	+				-0.2
3,469,479	-				-0.0
3,469,519	+				+0.5
3,469,527	-		SO3317	0.10	-1.8
3,469,527	-		SO3317	0.10	-0.8
3,469,596	+		SO3317	0.14	+0.5
3,469,602	+		SO3317	0.15	-0.8
3,469,602	+		SO3317	0.15	-1.2
3,469,604	-		SO3317	0.15	-1.6
3,469,770	+		SO3317	0.24	-0.5
3,469,778	-		SO3317	0.25	-0.0
3,469,789	+		SO3317	0.25	-0.5
3,469,797	-		SO3317	0.26	-0.2
3,469,797	-		SO3317	0.26	-0.8
3,469,896	+		SO3317	0.31	-1.1
3,469,986	+		SO3317	0.37	+0.7
3,469,988	+		SO3317	0.37	+0.6
3,469,996	-		SO3317	0.37	+0.3
3,470,006	-		SO3317	0.38	+1.2
3,470,027	-		SO3317	0.39	-0.8
3,470,066	-		SO3317	0.41	-0.7
3,470,083	-		SO3317	0.42	+0.7
3,470,101	+		SO3317	0.43	+1.1
3,470,147	+		SO3317	0.46	+1.9
3,470,147	+		SO3317	0.46	-0.5
3,470,155	-		SO3317	0.46	+0.4
3,470,194	-		SO3317	0.48	+0.5
3,470,197	-		SO3317	0.49	+0.7
3,470,230	-		SO3317	0.51	-1.7
3,470,571	+		SO3317	0.70	-1.5
3,470,579	-		SO3317	0.70	-1.0
3,470,637	-		SO3317	0.74	+0.9
3,470,701	+		SO3317	0.77	-0.3
3,470,701	+		SO3317	0.77	-1.5
3,470,766	+		SO3317	0.81	-2.2
3,470,910	+		SO3317	0.89	-0.4
3,471,051	-				+0.5
3,471,136	+				-1.6
3,471,236	-				+0.4
3,471,343	+		SO3318	0.20	-0.8
3,471,352	-		SO3318	0.21	+0.4
3,471,363	+		SO3318	0.22	-0.2
3,471,423	+		SO3318	0.29	-1.2
3,471,433	+		SO3318	0.30	+0.5
3,471,638	-		SO3318	0.53	+0.3
3,471,676	+		SO3318	0.57	+0.4
3,471,745	+		SO3318	0.65	-1.0
3,471,764	+		SO3318	0.67	-0.3
3,471,764	+		SO3318	0.67	-2.5
3,471,764	+		SO3318	0.67	+1.4
3,471,772	-		SO3318	0.68	+0.8
3,471,772	-		SO3318	0.68	-1.6
3,471,843	+		SO3318	0.76	+0.1
3,471,867	+		SO3318	0.79	+0.5
3,471,940	-		SO3318	0.87	-0.9
3,471,942	+		SO3318	0.87	+0.2
3,471,942	+		SO3318	0.87	+0.5
3,471,942	+		SO3318	0.87	-1.5
3,471,942	+		SO3318	0.87	-2.0
3,471,942	+		SO3318	0.87	+0.2
3,471,942	+		SO3318	0.87	+0.5
3,471,942	+		SO3318	0.87	+1.0
3,471,942	+		SO3318	0.87	-1.6
3,471,942	+		SO3318	0.87	-1.1
3,471,942	+		SO3318	0.87	+0.5
3,471,942	+		SO3318	0.87	+0.4
3,471,942	+		SO3318	0.87	-1.7
3,471,942	+		SO3318	0.87	-2.2
3,471,942	+		SO3318	0.87	-1.1
3,471,942	+		SO3318	0.87	+1.2
3,471,942	+		SO3318	0.87	+0.8
3,471,942	+		SO3318	0.87	-0.5
3,471,942	+		SO3318	0.87	-2.5
3,471,942	+		SO3318	0.87	-0.3
3,471,942	+		SO3318	0.87	-0.2
3,471,942	+		SO3318	0.87	+0.2
3,471,950	-		SO3318	0.88	-2.0
3,471,950	-		SO3318	0.88	+0.6
3,471,950	-		SO3318	0.88	-3.3
3,471,950	-		SO3318	0.88	-1.1
3,471,955	-		SO3318	0.88	+0.7
3,471,976	-				+0.3
3,472,024	+				-0.0
3,472,024	+				-0.3
3,472,032	-				-0.4
3,472,032	-				-1.2
3,472,032	-				+0.1
3,472,032	-				+0.1
3,472,032	-				+0.6
3,472,040	+				+1.0
3,472,041	-				+0.5