Strain Fitness in Shewanella oneidensis MR-1 around SO3017

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,127,845	+				-1.3
3,127,845	+				+1.6
3,127,845	+				+0.4
3,127,845	+				+1.6
3,127,853	-				-0.4
3,127,978	+				+1.1
3,127,978	+				-1.4
3,127,978	+				+0.6
3,127,978	+				-1.2
3,127,986	-				-1.1
3,127,998	-				-1.1
3,128,029	+				-1.5
3,128,168	-		SO3016	0.26	+1.0
3,128,234	-		SO3016	0.36	+0.4
3,128,244	+		SO3016	0.38	+1.6
3,128,344	+		SO3016	0.54	-1.5
3,128,352	-		SO3016	0.55	+0.1
3,128,352	-		SO3016	0.55	-0.2
3,128,352	-		SO3016	0.55	-2.7
3,128,389	+		SO3016	0.61	-0.5
3,128,513	+		SO3016	0.81	+0.1
3,128,598	-				-1.3
3,128,869	-		SO3017	0.28	-1.1
3,128,891	-		SO3017	0.31	-2.3
3,128,902	+		SO3017	0.32	-1.1
3,128,902	+		SO3017	0.32	+0.1
3,128,902	+		SO3017	0.32	-0.3
3,128,910	-		SO3017	0.33	-1.0
3,128,937	+		SO3017	0.36	+0.0
3,128,984	+		SO3017	0.42	+0.4
3,129,005	+		SO3017	0.44	-2.4
3,129,047	-		SO3017	0.49	+0.5
3,129,073	+		SO3017	0.52	-1.2
3,129,119	+		SO3017	0.57	-0.8
3,129,177	+		SO3017	0.64	-0.9
3,129,197	-		SO3017	0.66	-2.0
3,129,222	+		SO3017	0.69	-1.1
3,129,230	-		SO3017	0.70	-0.8
3,129,267	-		SO3017	0.74	+0.3
3,129,337	+		SO3017	0.83	-0.2
3,129,488	+				+0.6
3,129,686	-				-1.0
3,129,714	+				+1.1
3,129,740	+				-0.3
3,129,741	-				+0.7
3,129,748	-				-2.2
3,129,748	-				+1.0
3,129,913	+				-0.1
3,130,075	-	trpE	SO3019	0.13	+0.7
3,130,113	+	trpE	SO3019	0.15	-0.5
3,130,215	+	trpE	SO3019	0.21	-0.8
3,130,215	+	trpE	SO3019	0.21	-1.3
3,130,223	-	trpE	SO3019	0.21	-2.7
3,130,223	-	trpE	SO3019	0.21	+1.0
3,130,320	+	trpE	SO3019	0.27	-0.4
3,130,360	-	trpE	SO3019	0.29	-0.9