Strain Fitness in Shewanella oneidensis MR-1 around SO2983

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,109,436	+		SO2981	0.46	+3.9
3,109,669	+		SO2981	0.86	+4.0
3,109,702	-				+0.9
3,109,750	+				+2.8
3,109,808	+		SO2982	0.13	+4.5
3,109,808	+		SO2982	0.13	+3.5
3,109,843	+		SO2982	0.20	+4.8
3,109,910	-		SO2982	0.33	+0.9
3,109,910	-		SO2982	0.33	+2.8
3,109,949	-		SO2982	0.41	+3.8
3,109,950	-		SO2982	0.41	+2.1
3,109,961	+		SO2982	0.43	+4.6
3,110,003	+		SO2982	0.51	+3.7
3,110,045	-		SO2982	0.59	+3.8
3,110,098	+		SO2982	0.69	+2.3
3,110,103	+		SO2982	0.70	+4.3
3,110,113	+		SO2982	0.72	+1.1
3,110,113	+		SO2982	0.72	+4.4
3,110,113	+		SO2982	0.72	+2.5
3,110,113	+		SO2982	0.72	+3.0
3,110,116	-		SO2982	0.73	+4.6
3,110,121	-		SO2982	0.74	+4.5
3,110,121	-		SO2982	0.74	+4.5
3,110,121	-		SO2982	0.74	+3.2
3,110,121	-		SO2982	0.74	+2.3
3,110,121	-		SO2982	0.74	+3.8
3,110,141	+		SO2982	0.78	+4.1
3,110,168	-		SO2982	0.83	+1.9
3,110,173	+		SO2982	0.84	+4.1
3,110,173	+		SO2982	0.84	+1.6
3,110,181	-		SO2982	0.85	+2.7
3,110,216	-				+1.3
3,110,273	-				+1.1
3,110,273	-				-0.1
3,110,332	+		SO2983	0.20	+2.2
3,110,340	-		SO2983	0.22	-1.4
3,110,387	-		SO2983	0.34	+2.5
3,110,468	+		SO2983	0.55	+3.9
3,110,475	+		SO2983	0.57	+4.4
3,110,483	-		SO2983	0.59	+3.3
3,110,574	+		SO2983	0.82	+1.8
3,110,859	-		SO2984	0.41	-1.1
3,110,882	-		SO2984	0.45	-0.4
3,110,961	-		SO2984	0.59	-1.2
3,110,972	-		SO2984	0.61	-2.9
3,110,983	+		SO2984	0.63	-0.6
3,110,983	+		SO2984	0.63	-0.4
3,110,985	-		SO2984	0.64	-0.4
3,111,242	-				-2.0
3,111,274	+	O	SO2985	0.11	-1.6
3,111,285	+	O	SO2985	0.12	-2.6
3,111,401	-	O	SO2985	0.24	-1.7
3,111,478	+	O	SO2985	0.31	-0.4
3,111,487	+	O	SO2985	0.32	-0.5
3,111,509	-	O	SO2985	0.34	-1.6
3,111,598	-	O	SO2985	0.43	-0.3
3,111,598	-	O	SO2985	0.43	+0.0
3,111,629	+	O	SO2985	0.46	-1.6