Strain Fitness in Shewanella oneidensis MR-1 around SO2907

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,033,899	+		SO2906	0.77	+1.0
3,033,932	-		SO2906	0.80	-1.2
3,033,937	+		SO2906	0.81	-0.6
3,033,945	-		SO2906	0.81	-2.3
3,034,047	+				+0.9
3,034,305	+				+1.2
3,034,398	+				-0.9
3,034,399	-				-1.5
3,034,439	+				-1.4
3,034,894	-				-0.7
3,034,908	-				-0.7
3,034,914	+				+0.3
3,034,922	-				-0.8
3,035,006	+				+0.7
3,035,007	+				+0.5
3,035,014	-				-2.3
3,035,075	+		SO2907	0.11	-1.0
3,035,136	+		SO2907	0.13	-0.1
3,035,136	+		SO2907	0.13	-0.1
3,035,136	+		SO2907	0.13	-0.4
3,035,146	+		SO2907	0.13	-2.2
3,035,279	-		SO2907	0.18	+0.1
3,035,279	-		SO2907	0.18	+0.1
3,035,484	-		SO2907	0.26	+0.3
3,035,599	+		SO2907	0.30	+0.7
3,035,624	+		SO2907	0.31	-1.7
3,035,632	-		SO2907	0.32	-2.0
3,035,674	-		SO2907	0.33	-1.3
3,035,704	+		SO2907	0.34	-0.4
3,035,835	+		SO2907	0.39	-0.1
3,035,843	-		SO2907	0.40	-1.0
3,035,843	-		SO2907	0.40	-0.2
3,035,896	-		SO2907	0.42	-1.5
3,035,909	+		SO2907	0.42	-3.2
3,035,928	+		SO2907	0.43	+0.5
3,035,928	-		SO2907	0.43	+0.3
3,035,989	-		SO2907	0.45	+0.2
3,035,989	-		SO2907	0.45	-1.2
3,036,008	+		SO2907	0.46	+0.8
3,036,009	+		SO2907	0.46	+0.3
3,036,018	+		SO2907	0.46	-0.1
3,036,150	+		SO2907	0.51	-1.5
3,036,185	-		SO2907	0.52	-2.9
3,036,217	-		SO2907	0.54	-2.3
3,036,267	-		SO2907	0.56	+0.6
3,036,337	+		SO2907	0.58	-0.3
3,036,404	-		SO2907	0.61	-0.5
3,036,454	+		SO2907	0.63	-0.6
3,036,510	-		SO2907	0.65	-1.7
3,036,524	+		SO2907	0.65	-0.9
3,036,532	-		SO2907	0.65	+0.2
3,036,597	+		SO2907	0.68	-0.9
3,036,686	-		SO2907	0.71	+0.5
3,036,688	+		SO2907	0.71	-0.7
3,036,696	-		SO2907	0.72	+0.6
3,036,721	+		SO2907	0.73	+0.2
3,036,760	-		SO2907	0.74	+0.5
3,036,760	-		SO2907	0.74	-1.5
3,036,760	-		SO2907	0.74	-0.7
3,036,857	+		SO2907	0.78	+0.6
3,036,904	+		SO2907	0.80	+0.2
3,036,949	-		SO2907	0.81	+0.0
3,037,107	+		SO2907	0.87	-0.3
3,037,165	-		SO2907	0.89	-1.2
3,037,168	-		SO2907	0.89	+0.1
3,037,326	+				-1.7
3,037,344	-				-1.0
3,037,373	-				-1.1
3,037,373	-				-0.0
3,037,411	-				-0.2
3,037,664	+		SO_2908	0.20	+0.1
3,037,664	+		SO_2908	0.20	-1.2
3,037,665	-		SO_2908	0.20	-3.2
3,037,672	-		SO_2908	0.22	-1.4
3,037,672	-		SO_2908	0.22	-0.7
3,037,672	-		SO_2908	0.22	-2.0
3,037,672	-		SO_2908	0.22	-0.2
3,037,672	-		SO_2908	0.22	-0.8
3,037,672	-		SO_2908	0.22	+0.6
3,037,672	-		SO_2908	0.22	+0.1
3,037,672	-		SO_2908	0.22	+0.9
3,037,672	-		SO_2908	0.22	-0.6
3,037,672	-		SO_2908	0.22	-0.7
3,037,760	+		SO_2908	0.37	-2.1
3,037,768	-		SO_2908	0.39	+0.5
3,037,806	+		SO_2908	0.45	-2.2
3,037,811	+		SO_2908	0.46	-1.3
3,037,867	-		SO_2908	0.56	-1.3
3,038,008	-		SO_2908	0.81	-0.2
3,038,051	+		SO_2908	0.89	-3.5
3,038,058	+				-2.5
3,038,176	-				-0.4