Strain Fitness in Shewanella oneidensis MR-1 around SO2878

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,997,261	-				-1.3
2,997,293	+				+1.0
2,997,293	+				+0.4
2,997,455	+				-0.1
2,997,455	+				+0.5
2,997,801	+		SO2877	0.48	-1.9
2,997,979	+		SO2877	0.73	-1.2
2,997,987	-		SO2877	0.75	-1.2
2,998,041	+		SO2877	0.82	-2.1
2,998,156	+				-2.3
2,998,164	-				-0.9
2,998,292	+				-0.6
2,998,362	-		SO2878	0.11	-0.6
2,999,281	+				-1.2
2,999,378	-				-0.4
2,999,388	+				+0.4
2,999,388	+				+0.6
2,999,411	+				+0.6
2,999,411	+				+0.5
2,999,411	+				-1.4
2,999,419	-				-1.5
2,999,436	+				+0.4
2,999,444	-				-1.6
2,999,567	-				-2.5
2,999,648	+				+1.2
2,999,667	+	uraA	SO2879	0.10	+1.3
2,999,907	+	uraA	SO2879	0.30	+0.5
2,999,921	-	uraA	SO2879	0.31	-2.1
2,999,945	+	uraA	SO2879	0.33	-1.4
2,999,953	-	uraA	SO2879	0.33	-1.9
2,999,973	-	uraA	SO2879	0.35	-1.7
2,999,973	-	uraA	SO2879	0.35	+0.2
2,999,984	-	uraA	SO2879	0.36	-3.2
2,999,984	-	uraA	SO2879	0.36	-0.1
3,000,056	+	uraA	SO2879	0.42	+0.3
3,000,227	+	uraA	SO2879	0.55	-2.4
3,000,235	-	uraA	SO2879	0.56	-0.0