Strain Fitness in Shewanella oneidensis MR-1 around SO2771

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,893,142	-				-0.1
2,893,282	+		SO2769	0.24	+1.4
2,893,290	-		SO2769	0.25	+0.5
2,893,500	-		SO2769	0.50	+0.5
2,893,517	-		SO2769	0.52	+0.8
2,893,520	-		SO2769	0.53	-0.0
2,893,581	+		SO2769	0.60	+0.3
2,893,589	-		SO2769	0.61	+1.0
2,893,681	+		SO2769	0.71	-0.0
2,893,917	+				-0.3
2,894,021	+				+0.8
2,894,029	-				+0.3
2,894,029	-				+0.6
2,894,029	-				+1.0
2,894,061	+				+0.3
2,894,134	+	garR	SO2771	0.12	+0.2
2,894,142	-	garR	SO2771	0.13	-1.8
2,894,271	-	garR	SO2771	0.28	+0.4
2,894,574	-	garR	SO2771	0.62	-1.5
2,894,598	-	garR	SO2771	0.65	+0.1
2,894,721	-	garR	SO2771	0.79	-2.7
2,894,764	-	garR	SO2771	0.84	-0.5
2,894,789	+	garR	SO2771	0.87	+0.2
2,894,820	-				+0.4
2,894,848	+				-1.0
2,894,861	+				-1.5
2,895,250	+		SO2772	0.13	-2.2
2,895,250	+		SO2772	0.13	+0.3
2,895,289	+		SO2772	0.21	+0.9
2,895,306	+		SO2772	0.25	-2.3
2,895,530	+		SO2772	0.71	-2.1
2,895,548	+		SO2772	0.75	-0.9
2,895,548	+		SO2772	0.75	-2.3
2,895,548	+		SO2772	0.75	-0.2
2,895,556	-		SO2772	0.77	-1.5
2,895,556	-		SO2772	0.77	-0.3
2,895,588	+		SO2772	0.83	+1.1