Strain Fitness in Shewanella oneidensis MR-1 around SO2768

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,890,124	-	asnB-1	SO2767	0.48	-0.9
2,890,124	-	asnB-1	SO2767	0.48	-1.4
2,890,353	-	asnB-1	SO2767	0.62	+0.1
2,890,683	+	asnB-1	SO2767	0.82	+0.2
2,890,829	+				+0.8
2,891,004	-				-2.3
2,891,118	+				-0.7
2,891,125	+				+0.8
2,891,125	+				-0.5
2,891,126	-				-0.8
2,891,143	-				-1.8
2,891,274	+		SO2768	0.12	-1.6
2,891,282	-		SO2768	0.13	+0.2
2,891,378	+		SO2768	0.18	+0.0
2,891,442	+		SO2768	0.22	-0.5
2,891,450	-		SO2768	0.22	+0.6
2,891,450	-		SO2768	0.22	-0.0
2,891,450	-		SO2768	0.22	+0.9
2,891,492	-				-0.9
2,891,492	-		SO2768	0.24	-1.5
2,891,492	-		SO2768	0.24	-0.9
2,891,647	+		SO2768	0.33	-1.0
2,891,674	-		SO2768	0.35	-1.4
2,891,740	+		SO2768	0.38	-0.4
2,891,755	+		SO2768	0.39	-1.8
2,891,763	-		SO2768	0.39	-0.6
2,891,814	+		SO2768	0.42	-1.0
2,891,878	+		SO2768	0.46	+0.5
2,891,878	+		SO2768	0.46	-2.1
2,891,942	-		SO2768	0.49	-1.3
2,891,952	-		SO2768	0.50	-0.9
2,892,022	+		SO2768	0.54	-1.2
2,892,055	+		SO2768	0.56	-1.3
2,892,063	-		SO2768	0.56	-1.5
2,892,173	-		SO2768	0.62	+0.5
2,892,213	-		SO2768	0.65	+0.5
2,892,417	+		SO2768	0.76	-2.4
2,892,462	+		SO2768	0.79	+0.0
2,892,462	+		SO2768	0.79	+0.8
2,892,470	-		SO2768	0.79	+0.5
2,892,489	-		SO2768	0.80	-0.4
2,892,538	+		SO2768	0.83	+1.4
2,892,632	+		SO2768	0.88	-0.3
2,892,655	+		SO2768	0.89	-1.6
2,892,663	-		SO2768	0.90	+0.3
2,892,675	+				+0.6
2,892,688	+				-1.2
2,892,688	+				-2.0
2,892,723	+				-0.6
2,892,731	-				-1.5
2,892,831	-				-1.1
2,892,864	+				+0.2
2,892,988	+				+0.2
2,893,142	-				-0.1
2,893,282	+		SO2769	0.24	+1.4
2,893,290	-		SO2769	0.25	+0.5
2,893,500	-		SO2769	0.50	+0.5
2,893,517	-		SO2769	0.52	+0.8
2,893,520	-		SO2769	0.53	-0.0
2,893,581	+		SO2769	0.60	+0.3
2,893,589	-		SO2769	0.61	+1.0
2,893,681	+		SO2769	0.71	-0.0