Strain Fitness in Shewanella oneidensis MR-1 around SO2707

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,826,378	-	astB	SO2706	0.32	+0.9
2,826,396	-	astB	SO2706	0.34	-2.3
2,826,420	+	astB	SO2706	0.35	-0.6
2,826,508	-	astB	SO2706	0.42	-1.5
2,826,619	-	astB	SO2706	0.50	+0.4
2,826,741	-	astB	SO2706	0.59	+0.8
2,826,970	+	astB	SO2706	0.77	-1.0
2,827,013	-	astB	SO2706	0.80	-1.5
2,827,183	+				-0.3
2,827,260	+				-0.7
2,827,268	-				-0.0
2,827,527	+		SO2707	0.29	+0.3
2,827,535	-		SO2707	0.31	+1.0
2,827,535	-		SO2707	0.31	-1.1
2,827,535	-		SO2707	0.31	-0.1
2,827,535	-		SO2707	0.31	-0.4
2,827,556	+		SO2707	0.35	-1.2
2,827,676	-		SO2707	0.58	+0.6
2,827,705	+		SO2707	0.64	-2.4
2,827,719	-		SO2707	0.67	-0.7
2,827,749	-		SO2707	0.72	+0.3
2,827,845	+				+1.1
2,827,859	-				-0.2
2,828,035	+		SO2708	0.20	-1.8
2,828,035	+		SO2708	0.20	-0.2
2,828,043	-		SO2708	0.21	+0.1
2,828,043	-		SO2708	0.21	-0.1
2,828,241	-		SO2708	0.57	-0.2
2,828,305	+		SO2708	0.69	+0.3
2,828,308	+		SO2708	0.69	-2.8
2,828,515	+				-0.5
2,828,657	-		SO2710	0.11	+0.1
2,828,770	+		SO2710	0.30	+1.0
2,828,845	-		SO2710	0.42	-1.9
2,828,845	-		SO2710	0.42	+0.1