Strain Fitness in Shewanella oneidensis MR-1 around SO2703

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,819,498	+				+2.1
2,819,860	+		SO2702	0.42	+3.2
2,819,940	-		SO2702	0.50	+2.3
2,819,983	+		SO2702	0.54	+1.7
2,819,983	+		SO2702	0.54	+2.5
2,819,983	+		SO2702	0.54	+4.1
2,819,983	+		SO2702	0.54	+3.2
2,819,991	-		SO2702	0.55	+3.0
2,819,991	-		SO2702	0.55	+3.9
2,820,010	-		SO2702	0.56	+1.9
2,820,317	+		SO2702	0.85	+2.7
2,820,367	+		SO2702	0.90	+3.2
2,820,395	+				+1.4
2,820,460	-				+3.7
2,820,469	+				+3.7
2,820,477	-				+2.7
2,820,477	-				+3.6
2,820,484	-				+3.5
2,820,558	+		SO2703	0.17	+2.7
2,820,558	+		SO2703	0.17	+2.0
2,820,566	-		SO2703	0.18	+3.3
2,820,566	-		SO2703	0.18	+2.8
2,820,572	-		SO2703	0.19	+3.0
2,820,792	+		SO2703	0.57	+3.9
2,820,868	-		SO2703	0.70	+3.3
2,820,878	-		SO2703	0.72	+3.3
2,820,884	+		SO2703	0.73	+1.7
2,820,894	-		SO2703	0.74	+3.3
2,820,921	+		SO2703	0.79	+2.7
2,820,929	-		SO2703	0.80	+2.4
2,820,944	+		SO2703	0.83	+1.7
2,820,996	-				+2.9
2,820,996	-				+3.2
2,821,107	-				+1.0
2,821,149	-				+1.5
2,821,204	-				+3.7
2,821,226	-				+3.1
2,821,234	+				+1.9
2,821,284	-		SO2704	0.10	+2.4
2,821,412	-		SO2704	0.18	+3.0
2,821,502	-		SO2704	0.23	+3.6
2,821,534	+		SO2704	0.25	+3.2
2,821,573	-		SO2704	0.27	+3.1
2,821,573	-		SO2704	0.27	+4.0
2,821,696	+		SO2704	0.34	+3.2
2,821,923	-		SO2704	0.47	+4.4
2,821,928	+		SO2704	0.47	+0.4
2,821,993	+		SO2704	0.51	+3.2