Strain Fitness in Shewanella oneidensis MR-1 around SO2679

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,801,118	+		SO2676	0.79	+2.5
2,801,136	+		SO2676	0.86	+2.9
2,801,136	+		SO2676	0.86	+2.1
2,801,144	-		SO2676	0.88	+1.0
2,801,144	-		SO2676	0.88	+2.3
2,801,171	+				+3.2
2,801,179	-				+2.3
2,801,432	+		SO2677	0.42	+3.4
2,801,432	+		SO2677	0.42	+2.8
2,801,472	-		SO2677	0.49	+2.9
2,801,501	+		SO2677	0.54	+1.8
2,801,526	-		SO2677	0.58	+2.9
2,801,839	+		SO2678	0.36	+3.5
2,801,855	+		SO2678	0.45	+3.6
2,801,924	+		SO2678	0.80	+3.5
2,802,003	-				+3.4
2,802,012	+				+3.4
2,802,068	-				+2.5
2,802,072	+				+3.4
2,802,080	-				+4.4
2,802,122	-		SO2679	0.10	+3.4
2,802,122	-		SO2679	0.10	+1.9
2,802,201	+		SO2679	0.15	+2.6
2,802,208	+		SO2679	0.16	+0.8
2,802,313	+		SO2679	0.22	+3.4
2,802,321	-		SO2679	0.23	+2.6
2,802,357	+		SO2679	0.25	+3.0
2,802,440	+		SO2679	0.30	+3.5
2,802,448	-		SO2679	0.31	+2.7
2,802,448	-		SO2679	0.31	+3.1
2,802,475	+		SO2679	0.33	+2.5
2,802,554	-		SO2679	0.38	+3.0
2,802,630	-		SO2679	0.43	+1.5
2,802,664	+		SO2679	0.45	+1.9
2,802,742	-		SO2679	0.50	+3.7
2,802,848	+		SO2679	0.57	+2.6
2,802,869	+		SO2679	0.58	+3.8
2,802,886	+		SO2679	0.59	+2.7
2,802,929	+		SO2679	0.62	+3.7
2,802,945	+		SO2679	0.63	+2.6
2,802,946	+		SO2679	0.63	+3.2
2,803,035	+		SO2679	0.69	+2.4
2,803,041	-		SO2679	0.69	+4.0
2,803,043	-		SO2679	0.69	+2.6
2,803,061	-		SO2679	0.70	+3.6
2,803,089	+		SO2679	0.72	+3.6
2,803,097	-		SO2679	0.73	+3.6
2,803,097	-		SO2679	0.73	+4.1
2,803,101	+		SO2679	0.73	+3.5
2,803,101	+		SO2679	0.73	+3.7
2,803,101	+		SO2679	0.73	+3.6
2,803,101	+		SO2679	0.73	+3.7
2,803,109	-		SO2679	0.73	+3.1
2,803,109	-		SO2679	0.73	+2.2
2,803,109	-		SO2679	0.73	+1.3
2,803,141	-		SO2679	0.75	+2.4
2,803,199	-		SO2679	0.79	+2.5
2,803,199	-		SO2679	0.79	+2.5
2,803,382	-				+4.3
2,803,394	+				+3.7
2,803,511	+				+4.0
2,803,582	-				+3.3
2,803,606	-				+3.9
2,803,661	+				+3.4
2,803,676	+				+4.1
2,803,692	-		SO2680	0.11	+4.2
2,803,830	-		SO2680	0.20	+3.1
2,803,927	+		SO2680	0.26	+1.1
2,803,928	-		SO2680	0.26	+3.6
2,803,946	-		SO2680	0.27	+2.5
2,803,993	+		SO2680	0.30	+1.4
2,804,001	-		SO2680	0.31	+1.1
2,804,029	+		SO2680	0.32	+2.8
2,804,143	-		SO2680	0.40	+2.6
2,804,241	+		SO2680	0.46	+3.8
2,804,352	-		SO2680	0.53	+2.2
2,804,352	-		SO2680	0.53	+3.5
2,804,369	+		SO2680	0.54	+1.5