Strain Fitness in Shewanella oneidensis MR-1 around SO2655

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,790,537	-		SO2654	0.54	-1.2
2,790,573	+		SO2654	0.56	-1.4
2,790,581	-		SO2654	0.57	-2.8
2,790,622	+		SO2654	0.59	-1.3
2,790,622	+		SO2654	0.59	+0.2
2,790,630	-		SO2654	0.59	-2.5
2,790,630	-		SO2654	0.59	-1.2
2,790,819	+		SO2654	0.69	-1.4
2,790,946	+		SO2654	0.75	-0.5
2,790,946	+		SO2654	0.75	-0.2
2,790,953	-		SO2654	0.75	-1.8
2,790,970	+		SO2654	0.76	-0.9
2,790,978	-		SO2654	0.76	-2.2
2,791,117	+		SO2654	0.83	-3.6
2,791,125	-		SO2654	0.84	-0.6
2,791,343	-				-2.1
2,791,502	+				-0.4
2,791,502	+				-1.6
2,791,510	-				-1.0
2,791,520	-				-0.6
2,791,520	-				-0.5
2,791,579	+				-0.8
2,791,661	+		SO2655	0.17	-2.1
2,791,672	+		SO2655	0.18	-0.8
2,791,680	-		SO2655	0.19	-3.1
2,791,729	+		SO2655	0.24	-1.2
2,791,737	-		SO2655	0.25	-1.4
2,791,845	+		SO2655	0.36	-4.4
2,791,975	-		SO2655	0.50	+0.1
2,792,096	-		SO2655	0.63	-2.0
2,792,163	-		SO2655	0.70	-2.3
2,792,192	+		SO2655	0.73	-0.3
2,792,315	+		SO2655	0.86	+0.5
2,792,348	-		SO2655	0.89	-1.0
2,792,518	-		SO2656	0.23	+0.7
2,792,641	-		SO2656	0.71	-1.4
2,792,703	-				-1.2
2,792,889	+		SO2657	0.55	-0.2
2,792,939	+		SO2657	0.71	+0.5
2,793,026	+				+0.8
2,793,035	+				+0.5
2,793,083	+		SO2658	0.21	+0.7
2,793,153	+		SO2658	0.52	-0.2
2,793,256	+				+0.7
2,793,405	+		SO2659	0.44	-0.5
2,793,413	-		SO2659	0.46	-0.6
2,793,435	-		SO2659	0.53	-1.3