Strain Fitness in Shewanella oneidensis MR-1 around SO2573

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,702,507	+		SO2571	0.82	-1.9
2,702,589	+		SO2571	0.88	-0.7
2,702,658	+				+0.5
2,702,834	-				-1.5
2,703,056	-	ppiB-2	SO2572	0.55	-0.3
2,703,147	-	ppiB-2	SO2572	0.73	-0.7
2,703,199	+	ppiB-2	SO2572	0.83	-1.2
2,703,199	+	ppiB-2	SO2572	0.83	+0.0
2,703,199	+	ppiB-2	SO2572	0.83	+1.0
2,703,230	+	ppiB-2	SO2572	0.90	+0.4
2,703,309	-				+0.7
2,703,311	+				+0.0
2,703,316	+				-2.2
2,703,319	-				-0.9
2,703,319	-				+0.8
2,703,515	+		SO2573	0.11	+1.9
2,703,515	+		SO2573	0.11	-1.6
2,703,515	+		SO2573	0.11	-0.6
2,703,515	+		SO2573	0.11	-1.5
2,703,621	+		SO2573	0.35	-2.5
2,703,707	-		SO2573	0.54	-0.9
2,703,792	-		SO2573	0.73	-0.1
2,703,871	-				-2.5
2,703,973	+				-0.3
2,704,189	+				-0.7
2,704,197	-				-1.2
2,704,197	-				+1.6
2,704,197	-				-0.1
2,704,253	+				-1.8
2,704,253	+				+0.1
2,704,397	+		SO2575	0.34	+0.5
2,704,405	-		SO2575	0.37	-3.8
2,704,405	-		SO2575	0.37	+0.4
2,704,514	-		SO2575	0.76	-1.9
2,704,541	+		SO2575	0.85	-1.0
2,704,578	+				-0.7
2,704,609	-				+1.0
2,704,628	+				+0.5
2,704,630	+				-0.7
2,704,630	+				-1.5
2,704,636	-				-0.4
2,704,638	-				-0.9
2,704,638	-				-0.1
2,704,692	+				+0.5
2,704,707	+				+1.4
2,704,713	+				-0.4