Strain Fitness in Shewanella oneidensis MR-1 around SO2501

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,627,101	-				-1.4
2,627,134	+				-0.9
2,627,210	-		SO2501	0.16	-1.0
2,627,217	-		SO2501	0.17	-2.4
2,627,315	+		SO2501	0.31	-0.2
2,627,315	+		SO2501	0.31	-1.9
2,627,315	+		SO2501	0.31	+0.2
2,627,323	-		SO2501	0.33	+0.1
2,627,450	+		SO2501	0.52	-0.3
2,627,520	+		SO2501	0.62	-0.4
2,627,520	+		SO2501	0.62	-1.0
2,627,528	-		SO2501	0.63	-1.2
2,627,530	-		SO2501	0.64	+0.2
2,627,590	+		SO2501	0.72	-0.4
2,627,598	-		SO2501	0.74	-0.2
2,627,646	-		SO2501	0.81	-0.8
2,627,674	+		SO2501	0.85	-0.8
2,627,919	-				+0.4
2,628,074	+	exsB	SO2503	0.16	+0.9
2,628,082	-	exsB	SO2503	0.17	-2.0
2,628,185	+	exsB	SO2503	0.31	+0.4
2,628,197	+	exsB	SO2503	0.33	-0.1
2,628,197	+	exsB	SO2503	0.33	+0.4
2,628,251	-	exsB	SO2503	0.40	+0.3
2,628,252	-	exsB	SO2503	0.40	-0.4
2,628,294	+	exsB	SO2503	0.46	-0.8
2,628,474	-	exsB	SO2503	0.71	-1.7
2,628,474	-	exsB	SO2503	0.71	-1.0
2,628,523	+	exsB	SO2503	0.78	+0.3
2,628,523	+	exsB	SO2503	0.78	+0.6
2,628,531	-	exsB	SO2503	0.79	-0.7
2,628,623	-				-1.7
2,628,673	+				-0.9
2,628,737	-		SO2504	0.10	-2.0