Strain Fitness in Shewanella oneidensis MR-1 around SO2182

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,292,373	+		SO2180	0.49	+0.3
2,292,466	-		SO2180	0.59	+0.2
2,292,466	-		SO2180	0.59	+0.5
2,292,466	-		SO2180	0.59	-0.2
2,292,468	-		SO2180	0.59	+0.5
2,292,743	+		SO2180	0.88	-1.0
2,292,743	+		SO2180	0.88	+0.6
2,292,782	+				+0.5
2,292,868	+				+0.5
2,293,089	-		SO2181	0.64	-0.2
2,293,708	+		SO2182	0.56	+0.8
2,293,708	+		SO2182	0.56	+0.9
2,293,873	-		SO2182	0.84	+0.6
2,293,909	+		SO2182	0.90	+0.3
2,293,943	-				+0.2
2,293,987	+				+0.4
2,294,027	+				+0.4
2,294,203	-		SO2183	0.34	+0.7
2,294,216	+		SO2183	0.36	-1.2
2,294,216	+		SO2183	0.36	-1.4
2,294,298	-		SO2183	0.52	-1.5
2,294,313	-		SO2183	0.55	-0.1
2,294,431	-		SO2183	0.78	-1.1
2,294,460	+		SO2183	0.84	+0.3
2,294,527	+				+0.8
2,294,527	+				+0.0
2,294,527	+				-2.4
2,294,527	-				+0.5
2,294,535	-				-0.5
2,294,730	-				+1.0
2,294,824	+				+0.6
2,294,824	+				-0.7
2,294,859	+				+0.7
2,294,937	-				-1.8