Strain Fitness in Shewanella oneidensis MR-1 around SO2145

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,251,206	+				-2.2
2,251,206	+				-1.4
2,251,234	-				+0.5
2,251,302	+				-0.6
2,251,369	-				+0.7
2,251,369	-				+0.4
2,251,393	+				-1.9
2,251,407	+				+0.1
2,251,542	-				-0.7
2,251,593	-				-1.0
2,251,641	+				+0.5
2,251,689	+		SO2144	0.16	+0.6
2,251,697	-		SO2144	0.18	+0.8
2,251,702	-		SO2144	0.19	+1.4
2,251,713	+		SO2144	0.21	+0.4
2,251,749	+		SO2144	0.27	-1.9
2,251,756	+		SO2144	0.29	-0.3
2,251,891	+		SO2144	0.53	+0.5
2,251,922	+		SO2144	0.59	-0.3
2,251,928	+		SO2144	0.60	-2.1
2,251,928	+		SO2144	0.60	-2.7
2,252,036	+		SO2144	0.80	+0.5
2,252,108	-				+0.2
2,252,330	-		SO2145	0.21	+0.2
2,252,410	+		SO2145	0.29	-1.5
2,252,410	+		SO2145	0.29	-1.8
2,252,418	-		SO2145	0.30	-1.7
2,252,521	+		SO2145	0.41	-1.5
2,252,521	+		SO2145	0.41	+0.7
2,252,529	-		SO2145	0.42	+0.0
2,252,529	-		SO2145	0.42	-1.5
2,252,529	-		SO2145	0.42	-0.9
2,252,739	+		SO2145	0.64	+0.5
2,252,779	-		SO2145	0.69	-0.0
2,252,783	+		SO2145	0.69	+0.6
2,252,793	+		SO2145	0.70	-1.3
2,252,861	+		SO2145	0.77	+0.2
2,252,866	+		SO2145	0.78	-1.6
2,252,869	-		SO2145	0.78	-0.2
2,252,869	-		SO2145	0.78	-0.7
2,252,869	-		SO2145	0.78	-0.1
2,252,869	-		SO2145	0.78	-1.0
2,252,897	+		SO2145	0.81	-0.3
2,252,897	+		SO2145	0.81	-0.5
2,253,033	+				+0.3
2,253,043	+				+1.4
2,253,118	+		SO2146	0.12	+0.7
2,253,126	-		SO2146	0.14	-0.4
2,253,348	+		SO2146	0.70	+0.8
2,253,383	+		SO2146	0.79	-0.4
2,253,394	+		SO2146	0.82	-0.9
2,253,422	+		SO2146	0.89	-0.7
2,253,448	-				+0.1
2,253,474	+				+0.3
2,253,474	+				+0.2
2,253,474	+				-0.0
2,253,482	-				+0.7
2,253,551	+				-1.6
2,253,673	-				-0.4