Strain Fitness in Shewanella oneidensis MR-1 around SO1991

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,092,256	+				-1.8
2,092,274	+				-2.4
2,092,274	+				-0.6
2,092,274	+				+0.4
2,092,302	-				-2.4
2,092,368	+				+0.5
2,092,376	-				-0.6
2,092,378	-				-2.0
2,092,412	+				-1.0
2,092,444	-				-0.3
2,092,482	-				+1.2
2,092,501	+				+0.4
2,092,638	-		SO1990	0.20	-0.2
2,092,739	-		SO1990	0.36	+0.1
2,092,746	-		SO1990	0.37	-0.6
2,092,889	-		SO1990	0.59	-2.0
2,092,917	-		SO1990	0.63	-0.0
2,092,953	+		SO1990	0.69	-1.3
2,092,998	+		SO1990	0.76	-2.3
2,093,098	-				-2.2
2,093,201	+				+0.1
2,093,209	-				+0.4
2,093,379	+		SO1991	0.49	-2.7
2,093,456	-		SO1991	0.70	-0.2
2,093,478	-		SO1991	0.76	+0.5
2,093,580	+				+0.9
2,093,580	-				-1.9
2,093,607	+				+0.2
2,093,617	+				+1.1
2,093,625	-				-0.4
2,093,722	+				+0.5
2,093,724	+				-1.7
2,093,753	-				-1.2
2,094,012	-				-0.6
2,094,024	+				-0.2
2,094,204	-		SO1994	0.18	-0.8
2,094,231	-		SO1994	0.20	-1.4
2,094,240	+		SO1994	0.21	+0.4
2,094,267	+		SO1994	0.23	-0.9
2,094,400	+		SO1994	0.33	-0.4
2,094,400	+		SO1994	0.33	+0.1
2,094,400	+		SO1994	0.33	-1.1
2,094,408	-		SO1994	0.33	-0.9
2,094,500	+		SO1994	0.41	+0.7
2,094,500	+		SO1994	0.41	+0.6
2,094,500	+		SO1994	0.41	+1.0
2,094,508	-		SO1994	0.41	-0.4