Strain Fitness in Shewanella oneidensis MR-1 around SO1967

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
2,071,115	+				+0.8
2,071,115	+				-0.3
2,071,115	+				+0.8
2,071,301	+		SO1966	0.24	+0.2
2,071,696	-		SO1966	0.73	+0.6
2,071,756	+		SO1966	0.81	-3.0
2,071,872	-				-1.1
2,071,877	-				+0.4
2,072,024	+				+0.1
2,072,035	+				+0.2
2,072,069	+				-1.0
2,072,097	+				+0.1
2,072,144	+				-0.3
2,072,183	+		SO1967	0.12	-1.5
2,072,210	-		SO1967	0.14	-0.6
2,072,210	-		SO1967	0.14	-0.6
2,072,310	-		SO1967	0.22	-1.8
2,072,320	+		SO1967	0.23	-0.7
2,072,512	-		SO1967	0.38	-1.8
2,072,582	+		SO1967	0.44	-0.9
2,072,634	+		SO1967	0.48	+0.6
2,072,681	+		SO1967	0.52	+0.4
2,072,717	+		SO1967	0.54	+0.6
2,072,766	+		SO1967	0.58	-1.4
2,072,774	-		SO1967	0.59	-1.0
2,072,840	+		SO1967	0.64	-0.1
2,072,883	-		SO1967	0.68	+0.2
2,073,086	+		SO1967	0.84	-0.3
2,073,094	-		SO1967	0.84	+0.2
2,073,166	+		SO1967	0.90	-1.1
2,073,185	-				+0.2
2,073,240	-				+0.5
2,073,447	-				+1.8
2,073,516	+				+0.1
2,073,707	+				+0.4
2,073,710	-				+0.8
2,073,727	-				-0.1
2,073,801	+		SO1968	0.20	+0.8
2,074,044	-				+0.3
2,074,051	+				+0.2
2,074,184	+		SO1969	0.13	-2.3
2,074,192	-		SO1969	0.15	+0.4
2,074,192	-		SO1969	0.15	-1.0
2,074,192	-		SO1969	0.15	-0.6
2,074,192	-		SO1969	0.15	-1.0
2,074,192	-		SO1969	0.15	-2.0
2,074,206	+		SO1969	0.18	-1.9