Strain Fitness in Shewanella oneidensis MR-1 around SO1839

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,928,014	-		SO1836	0.75	-0.4
1,928,026	+		SO1836	0.78	-1.2
1,928,026	+		SO1836	0.78	+0.5
1,928,057	-		SO1836	0.86	-1.4
1,928,069	-		SO1836	0.89	-2.2
1,928,084	+				+1.0
1,928,218	+				-1.4
1,928,229	+				+0.5
1,928,231	-				+1.2
1,928,236	-				-2.2
1,928,237	+				+0.3
1,928,237	+				+0.9
1,928,293	+				-0.6
1,928,293	+				+0.5
1,928,357	+				+0.8
1,928,371	-				+1.8
1,928,400	+				+0.4
1,928,464	-				-1.3
1,928,473	+				+1.6
1,928,481	-				-0.8
1,928,512	-				+0.8
1,928,518	+				+1.0
1,928,529	-				-0.3
1,928,564	+				+0.9
1,928,571	+				+0.3
1,928,582	+				-1.3
1,928,582	+				-0.9
1,928,582	+				-1.5
1,928,590	-				-2.9
1,928,630	+				+0.1
1,928,630	+				+0.1
1,928,638	-				-0.3
1,928,638	-				+0.7
1,928,642	-				+0.4
1,928,661	+				-1.9
1,928,661	+				-1.9
1,928,661	+				+0.6
1,928,661	+				-2.0
1,928,669	-				-0.2
1,928,669	-				+0.7
1,928,669	-				-1.2
1,928,669	-				-0.2
1,928,680	+				+0.9
1,928,724	-				-1.1
1,928,724	-				+0.2
1,928,796	+				-0.2
1,928,796	+				-1.4
1,928,796	+				-0.0
1,928,796	+				-0.5
1,928,804	-				+0.6
1,928,806	+				+0.3
1,928,808	+				-1.8
1,928,861	+				+1.7
1,928,861	+				-1.9
1,928,869	-				-1.2
1,928,876	-				+0.8
1,928,877	-				-0.1
1,928,900	-				-0.5
1,928,923	+				-0.1
1,928,930	-				+1.1
1,929,061	-		SO1839	0.20	-0.2
1,929,069	-		SO1839	0.21	+0.1
1,929,186	-		SO1839	0.35	+0.6
1,929,248	+		SO1839	0.43	+0.8
1,929,248	+		SO1839	0.43	-2.8
1,929,278	+		SO1839	0.46	+0.7
1,929,278	+		SO1839	0.46	+0.5
1,929,279	-		SO1839	0.46	+1.2
1,929,285	-		SO1839	0.47	+0.4
1,929,286	-		SO1839	0.47	-0.1
1,929,286	-		SO1839	0.47	+0.4
1,929,314	+		SO1839	0.50	-0.8
1,929,441	+		SO1839	0.66	-1.0
1,929,477	+		SO1839	0.70	+0.2
1,929,477	+		SO1839	0.70	-0.4
1,929,498	+		SO1839	0.73	-2.9
1,929,626	+		SO1839	0.88	+0.7
1,929,641	+				-1.1
1,929,641	+				+0.5
1,929,641	+				-0.1
1,929,641	+				-3.0
1,929,650	-				-0.1
1,929,746	+				+0.2
1,929,746	+				+0.6
1,929,746	+				-0.4
1,929,746	+				+0.2
1,929,746	+				+1.6
1,929,746	+				-1.7
1,929,754	-				-1.3
1,929,754	-				-0.7
1,929,754	-				-0.1
1,929,754	-				-2.6
1,929,765	-				-1.5
1,929,781	-				-1.1
1,929,899	-				-2.3
1,929,900	+				+0.0
1,929,911	+				+0.3
1,929,916	+				+0.9
1,929,938	+				+0.3
1,929,946	-				+1.0
1,929,948	+				+0.4
1,929,948	+				-1.1
1,930,005	+		SO1840	0.14	+0.7
1,930,066	-		SO1840	0.20	-2.7
1,930,160	-		SO1840	0.28	+0.1
1,930,185	-		SO1840	0.31	+1.4
1,930,381	+		SO1840	0.49	+0.0
1,930,407	-		SO1840	0.51	+0.9
1,930,511	+		SO1840	0.61	-1.0
1,930,511	+		SO1840	0.61	+0.2
1,930,511	+		SO1840	0.61	-0.1
1,930,511	+		SO1840	0.61	+0.3
1,930,519	-		SO1840	0.62	+0.6
1,930,525	+		SO1840	0.62	-1.2
1,930,526	+		SO1840	0.62	+1.2
1,930,546	+		SO1840	0.64	-1.1
1,930,694	+		SO1840	0.78	+0.1