Strain Fitness in Shewanella oneidensis MR-1 around SO1836

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,926,797	+				-0.0
1,926,809	+				-0.9
1,926,809	+				+0.5
1,926,857	-				-0.0
1,927,175	-		SO1834	0.58	+0.9
1,927,223	+		SO1834	0.67	-0.5
1,927,223	+		SO1834	0.67	+1.5
1,927,231	-		SO1834	0.69	+0.4
1,927,231	-		SO1834	0.69	+0.5
1,927,231	-		SO1834	0.69	+0.1
1,927,231	-		SO1834	0.69	-2.4
1,927,270	+		SO1834	0.76	-0.7
1,927,371	-				-1.2
1,927,416	+				+0.5
1,927,416	+				-1.9
1,927,416	+				+0.4
1,927,424	-				+0.8
1,927,424	-				-0.1
1,927,424	-				+0.6
1,927,495	+				-1.6
1,927,537	+				+0.9
1,927,546	-				+0.1
1,927,552	-				+0.5
1,927,557	-				+0.1
1,927,597	-		SO1835	0.33	+0.5
1,928,014	-		SO1836	0.75	-0.4
1,928,026	+		SO1836	0.78	-1.2
1,928,026	+		SO1836	0.78	+0.5
1,928,057	-		SO1836	0.86	-1.4
1,928,069	-		SO1836	0.89	-2.2
1,928,084	+				+1.0
1,928,218	+				-1.4
1,928,229	+				+0.5
1,928,231	-				+1.2
1,928,236	-				-2.2
1,928,237	+				+0.3
1,928,237	+				+0.9
1,928,293	+				-0.6
1,928,293	+				+0.5
1,928,357	+				+0.8
1,928,371	-				+1.8
1,928,400	+				+0.4
1,928,464	-				-1.3
1,928,473	+				+1.6
1,928,481	-				-0.8
1,928,512	-				+0.8
1,928,518	+				+1.0
1,928,529	-				-0.3
1,928,564	+				+0.9
1,928,571	+				+0.3
1,928,582	+				-1.3
1,928,582	+				-0.9
1,928,582	+				-1.5
1,928,590	-				-2.9
1,928,630	+				+0.1
1,928,630	+				+0.1
1,928,638	-				-0.3
1,928,638	-				+0.7
1,928,642	-				+0.4
1,928,661	+				-1.9
1,928,661	+				-1.9
1,928,661	+				+0.6
1,928,661	+				-2.0
1,928,669	-				-0.2
1,928,669	-				+0.7
1,928,669	-				-1.2
1,928,669	-				-0.2
1,928,680	+				+0.9
1,928,724	-				-1.1
1,928,724	-				+0.2
1,928,796	+				-0.2
1,928,796	+				-1.4
1,928,796	+				-0.0
1,928,796	+				-0.5
1,928,804	-				+0.6
1,928,806	+				+0.3
1,928,808	+				-1.8
1,928,861	+				+1.7
1,928,861	+				-1.9
1,928,869	-				-1.2
1,928,876	-				+0.8
1,928,877	-				-0.1
1,928,900	-				-0.5
1,928,923	+				-0.1
1,928,930	-				+1.1
1,929,061	-		SO1839	0.20	-0.2
1,929,069	-		SO1839	0.21	+0.1