Strain Fitness in Shewanella oneidensis MR-1 around SO1707

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,794,782	+				+1.3
1,794,960	+		SO_1706	0.16	-0.7
1,794,965	+		SO_1706	0.17	+0.8
1,794,965	+		SO_1706	0.17	-0.0
1,794,968	-		SO_1706	0.17	+0.9
1,794,973	-		SO_1706	0.18	-1.3
1,795,262	-		SO_1706	0.47	+0.9
1,795,353	+		SO_1706	0.57	+0.7
1,795,530	-		SO_1706	0.75	+1.3
1,795,625	-		SO_1706	0.85	+0.3
1,795,627	+		SO_1706	0.85	-0.6
1,795,798	+				-0.3
1,795,853	+				+0.6
1,796,200	-		SO1707	0.39	+1.4
1,796,252	+		SO1707	0.43	-1.0
1,796,252	+		SO1707	0.43	+0.3
1,796,260	-		SO1707	0.44	+0.1
1,796,383	-		SO1707	0.55	-0.6
1,796,383	-		SO1707	0.55	-0.8
1,796,439	+		SO1707	0.60	+0.2
1,796,439	+		SO1707	0.60	+1.0
1,796,439	+		SO1707	0.60	+0.0
1,796,452	-		SO1707	0.61	-2.1
1,796,476	-		SO1707	0.63	+0.1
1,796,578	+		SO1707	0.72	+0.8
1,796,739	-		SO1707	0.87	+0.6
1,796,773	+		SO1707	0.90	+0.9
1,796,995	-				+0.4
1,796,995	-				+1.5
1,797,033	+				-0.2
1,797,095	-				+1.1
1,797,097	-				+0.5
1,797,102	-				-0.2
1,797,119	+				+1.4
1,797,134	-				+0.1
1,797,441	-	cat2	SO1708	0.19	+0.5
1,797,686	-	cat2	SO1708	0.38	-1.8
1,797,715	-	cat2	SO1708	0.40	+0.5
1,797,769	+	cat2	SO1708	0.44	+0.1
1,797,882	-	cat2	SO1708	0.53	-1.2