Strain Fitness in Shewanella oneidensis MR-1 around SO1623

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,703,180	+		SO_1620	0.84	+0.3
1,703,187	+		SO_1620	0.85	-1.2
1,703,195	-		SO_1620	0.86	+0.6
1,703,308	+				-1.1
1,703,316	-				-1.1
1,703,316	-				-0.3
1,703,320	+				-1.0
1,703,327	+				+0.7
1,703,327	+				-0.1
1,703,397	+				-0.0
1,703,471	-				+0.5
1,703,587	-				+0.0
1,703,634	+				-0.3
1,703,730	+				+0.2
1,703,730	+				+1.0
1,703,730	+				-1.2
1,703,730	+				-0.0
1,703,730	+				-1.0
1,703,730	+				+0.3
1,703,738	-				-0.3
1,703,738	-				+0.2
1,703,738	-				+0.2
1,703,738	-				-0.5
1,703,738	-				-0.0
1,703,738	-				-1.0
1,703,738	-				-1.2
1,703,738	-				-0.3
1,703,738	-				-1.1
1,703,754	+		SO1622	0.12	-1.2
1,703,877	+		SO1622	0.38	-0.9
1,703,939	+		SO1622	0.51	-0.6
1,703,954	+		SO1622	0.55	+0.8
1,704,050	+		SO1622	0.75	+0.9
1,704,148	-				-1.7
1,704,400	-	ptsG	SO1623	0.19	-1.0
1,704,538	+	ptsG	SO1623	0.28	-1.5
1,704,573	-	ptsG	SO1623	0.30	-1.4
1,704,656	+	ptsG	SO1623	0.36	-2.2
1,704,689	+	ptsG	SO1623	0.38	+0.9
1,704,689	+	ptsG	SO1623	0.38	-0.2
1,704,721	-	ptsG	SO1623	0.40	-0.7
1,704,794	+	ptsG	SO1623	0.45	-0.9
1,704,845	+	ptsG	SO1623	0.49	-0.1
1,704,865	+	ptsG	SO1623	0.50	+0.7
1,705,013	+	ptsG	SO1623	0.60	-0.4
1,705,113	+	ptsG	SO1623	0.66	-2.1
1,705,207	+	ptsG	SO1623	0.73	+0.6
1,705,350	+	ptsG	SO1623	0.82	-2.1
1,705,419	-	ptsG	SO1623	0.87	+0.1
1,705,419	-	ptsG	SO1623	0.87	-2.3
1,705,442	+	ptsG	SO1623	0.88	-0.1
1,705,442	+	ptsG	SO1623	0.88	+0.7
1,705,443	+	ptsG	SO1623	0.88	-0.1
1,705,445	+	ptsG	SO1623	0.89	-1.5
1,705,455	-	ptsG	SO1623	0.89	-0.8
1,705,513	+				+0.2
1,705,521	-				-1.4
1,705,696	-				+1.0
1,705,789	+				-1.0
1,705,796	-				-1.2
1,705,974	+	purU	SO1624	0.25	+0.4
1,706,109	-	purU	SO1624	0.42	+1.3
1,706,238	-	purU	SO1624	0.57	-2.2
1,706,347	+	purU	SO1624	0.71	-0.4
1,706,563	-				-0.2