Strain Fitness in Shewanella oneidensis MR-1 around SO1396

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,452,117	+				-0.4
1,452,364	-		SO1395	0.73	-0.4
1,452,390	+		SO1395	0.80	-1.7
1,452,467	+				-0.1
1,452,507	-				-1.4
1,452,507	-				-0.7
1,452,534	+				+0.1
1,452,744	-				-0.3
1,452,744	-				+0.0
1,452,783	+		SO1396	0.11	+1.5
1,452,892	+		SO1396	0.20	+1.1
1,452,937	-		SO1396	0.24	-0.8
1,452,972	+		SO1396	0.27	-1.5
1,452,985	-		SO1396	0.28	-0.8
1,453,016	-		SO1396	0.30	-1.4
1,453,041	-		SO1396	0.33	+0.3
1,453,078	+		SO1396	0.36	-1.7
1,453,086	-		SO1396	0.36	-0.5
1,453,086	-		SO1396	0.36	-1.9
1,453,111	-		SO1396	0.38	-0.1
1,453,134	+		SO1396	0.40	+0.5
1,453,168	+		SO1396	0.43	+0.3
1,453,169	+		SO1396	0.43	+0.7
1,453,169	+		SO1396	0.43	+0.4
1,453,283	-		SO1396	0.53	+0.6
1,453,310	+		SO1396	0.55	-1.3
1,453,346	+		SO1396	0.58	-1.5
1,453,354	+		SO1396	0.59	+1.0
1,453,426	-		SO1396	0.65	-0.9
1,453,553	-		SO1396	0.75	-0.0
1,453,553	-		SO1396	0.75	-0.1
1,453,679	+		SO1396	0.86	+1.2
1,453,729	-		SO1396	0.90	-0.3
1,453,800	+				+0.2
1,453,812	-				+1.3
1,453,812	-				-0.1
1,453,812	-				+1.1
1,453,892	-		SO1397	0.14	-0.4
1,453,922	+		SO1397	0.21	-1.1
1,453,922	+		SO1397	0.21	-2.2
1,453,935	+		SO1397	0.24	-1.4
1,454,044	+		SO1397	0.49	+0.7
1,454,044	+		SO1397	0.49	+1.0
1,454,044	+		SO1397	0.49	+0.1
1,454,044	+		SO1397	0.49	-0.5
1,454,050	-		SO1397	0.50	-1.2
1,454,052	-		SO1397	0.51	+0.5
1,454,123	+		SO1397	0.67	-2.0
1,454,133	+		SO1397	0.69	-0.5
1,454,133	+		SO1397	0.69	-1.0
1,454,141	-		SO1397	0.71	-1.2
1,454,141	-		SO1397	0.71	-1.6
1,454,154	-		SO1397	0.74	+0.9
1,454,298	+				+0.4
1,454,304	-				-0.2
1,454,306	-				+1.4
1,454,306	-				-0.0
1,454,306	-				-2.3
1,454,315	-				-0.2
1,454,503	+				-0.8
1,454,511	+				-1.7
1,454,516	+				-2.7
1,454,573	+				-1.0
1,454,614	-		SO1399	0.15	-1.4
1,454,761	-		SO1399	0.60	-0.4