Strain Fitness in Shewanella oneidensis MR-1 around SO1323

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,375,743	+		SO1321	0.82	+0.7
1,375,931	-				-0.7
1,376,761	+		SO1323	0.46	+0.0
1,376,816	-		SO1323	0.73	-0.8
1,376,823	+		SO1323	0.76	+1.1
1,376,823	+		SO1323	0.76	+1.0
1,376,830	-		SO1323	0.80	-3.2
1,376,873	-				-1.5
1,376,895	+				+0.1
1,376,999	+				-0.1
1,377,008	-				+0.1
1,377,165	-	gltD	SO1324	0.16	+0.5
1,377,203	-	gltD	SO1324	0.19	-1.1
1,377,343	-	gltD	SO1324	0.29	+0.3
1,377,381	-	gltD	SO1324	0.32	-1.0
1,377,383	+	gltD	SO1324	0.32	-1.0
1,377,419	-	gltD	SO1324	0.34	+0.8
1,377,502	-	gltD	SO1324	0.40	-2.2
1,377,502	-	gltD	SO1324	0.40	+1.2
1,377,502	-	gltD	SO1324	0.40	+0.9
1,377,558	+	gltD	SO1324	0.44	+0.2
1,377,723	+	gltD	SO1324	0.56	+1.3
1,377,723	+	gltD	SO1324	0.56	-1.7
1,377,731	-	gltD	SO1324	0.57	-0.1
1,377,731	-	gltD	SO1324	0.57	+1.2
1,377,762	-	gltD	SO1324	0.59	+0.7
1,377,772	-	gltD	SO1324	0.60	-2.3
1,377,787	-	gltD	SO1324	0.61	-0.9
1,377,864	+	gltD	SO1324	0.66	-0.2
1,377,864	+	gltD	SO1324	0.66	-0.9
1,377,864	+	gltD	SO1324	0.66	+0.9
1,377,864	+	gltD	SO1324	0.66	+0.7