Strain Fitness in Shewanella oneidensis MR-1 around SO1305

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,356,695	+		SO1303	0.42	-1.5
1,356,718	+		SO1303	0.45	+1.0
1,356,726	-		SO1303	0.46	-0.2
1,356,823	+		SO1303	0.58	+0.3
1,356,823	+		SO1303	0.58	-0.7
1,356,831	-		SO1303	0.59	+0.0
1,356,831	-		SO1303	0.59	-1.7
1,356,831	-		SO1303	0.59	-0.2
1,356,831	-		SO1303	0.59	+0.1
1,356,969	+		SO1303	0.76	-0.6
1,356,977	-		SO1303	0.77	+0.1
1,357,047	-		SO1303	0.85	+0.1
1,357,061	+		SO1303	0.87	+1.7
1,357,748	-		SO1305	0.33	-0.2
1,357,794	-		SO1305	0.43	+1.5
1,357,816	+		SO1305	0.48	+0.6
1,358,299	+		SO1306	0.67	+0.6
1,358,357	+		SO1306	0.84	-1.2
1,358,408	-				+0.8
1,358,431	+				-1.6
1,358,439	-				+0.1
1,358,580	-				+1.1
1,358,621	-				+0.1
1,358,723	+	aqpZ	SO1307	0.16	-1.7
1,358,755	-	aqpZ	SO1307	0.21	-0.5
1,358,765	-	aqpZ	SO1307	0.22	-0.2
1,358,792	+	aqpZ	SO1307	0.26	+0.2
1,358,800	-	aqpZ	SO1307	0.27	-2.2
1,358,826	+	aqpZ	SO1307	0.31	+0.5
1,358,834	-	aqpZ	SO1307	0.32	+1.1
1,358,861	-	aqpZ	SO1307	0.36	+0.1
1,358,995	-	aqpZ	SO1307	0.55	-0.6