Strain Fitness in Shewanella oneidensis MR-1 around SO1264

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,310,896	+				-0.1
1,310,985	-				-1.6
1,310,992	-				-1.9
1,311,129	+		SO1262	0.20	+1.9
1,311,129	+		SO1262	0.20	-0.2
1,311,137	-		SO1262	0.21	-1.7
1,311,137	-		SO1262	0.21	+0.4
1,311,137	-		SO1262	0.21	+1.5
1,311,154	+		SO1262	0.25	+0.4
1,311,154	+		SO1262	0.25	-0.0
1,311,154	+		SO1262	0.25	-1.0
1,311,162	-		SO1262	0.26	-2.1
1,311,184	-		SO1262	0.30	+0.1
1,311,186	+		SO1262	0.31	-1.4
1,311,470	+		SO1262	0.86	-0.0
1,311,485	+		SO1262	0.89	-0.5
1,311,497	+				+0.4
1,311,552	-				-0.7
1,311,802	+				+0.7
1,311,812	+				+0.1
1,311,812	+				+0.6
1,311,812	+				+0.1
1,311,899	+				-1.1
1,311,940	-				-0.7
1,312,042	+		SO1264	0.12	-0.8
1,312,080	-		SO1264	0.15	-2.4
1,312,080	-		SO1264	0.15	-0.1
1,312,110	-		SO1264	0.17	+0.2
1,312,163	+		SO1264	0.21	-1.4
1,312,183	+		SO1264	0.23	+0.5
1,312,183	+		SO1264	0.23	-1.6
1,312,191	-		SO1264	0.23	+0.8
1,312,191	-		SO1264	0.23	-0.2
1,312,191	-		SO1264	0.23	-2.0
1,312,226	-		SO1264	0.26	-1.4
1,312,228	+		SO1264	0.26	+0.4
1,312,261	+		SO1264	0.29	-0.6
1,312,460	+		SO1264	0.44	-1.6
1,312,550	-		SO1264	0.51	-1.7
1,312,588	-		SO1264	0.54	-1.2
1,312,675	-		SO1264	0.60	-0.7
1,312,689	-		SO1264	0.61	-0.5
1,312,937	+		SO1264	0.80	+0.9
1,313,085	-				-0.1
1,313,435	-				-0.9
1,313,455	-				-2.4
1,313,473	+				+0.3
1,313,498	+		SO1265	0.12	+0.3
1,313,682	+		SO1265	0.46	+0.8
1,313,686	-		SO1265	0.47	-0.7
1,313,833	+		SO1265	0.73	-1.4
1,313,989	-				+1.2
1,313,991	+				-0.1
1,313,991	+				-0.4
1,313,991	+				-1.5
1,313,991	+				+0.0
1,313,991	+				-0.5
1,313,999	-				+0.6
1,314,001	+				+0.5