Strain Fitness in Shewanella oneidensis MR-1 around SO1187

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
1,230,555	+				+0.3
1,230,562	-				-0.0
1,230,586	+				-1.4
1,230,608	-				+0.7
1,230,620	-				-1.2
1,230,626	-				-0.4
1,230,626	-				+0.3
1,230,628	-				-0.9
1,230,648	-				-0.6
1,230,650	-				-0.9
1,230,650	-				+0.6
1,230,650	-				+0.1
1,230,719	+				-2.9
1,230,727	-				+0.2
1,230,727	-				+0.1
1,230,796	+				-1.8
1,231,159	+				-0.1
1,231,393	-		SO1187	0.40	+2.2
1,231,403	-		SO1187	0.42	-1.4
1,231,546	+		SO1187	0.64	-0.0
1,231,546	+		SO1187	0.64	+0.9
1,231,698	+		SO1187	0.88	+0.0
1,231,730	+				-1.0
1,231,746	+				-1.3
1,231,786	-				+0.5
1,231,812	+				+0.9
1,231,818	-				-1.3
1,232,123	+				-1.1
1,232,256	-				-1.3
1,232,286	+				+0.5
1,232,348	+		SO1188	0.20	+0.8
1,232,429	+		SO1188	0.35	-0.9
1,232,511	+		SO1188	0.51	+0.1
1,232,511	+		SO1188	0.51	-1.7
1,232,511	+		SO1188	0.51	+0.6
1,232,616	-		SO1188	0.70	-1.1
1,232,617	-		SO1188	0.71	+0.0
1,232,723	+				+1.1
1,232,731	-				-0.2