Experiment: Cisplatin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0667 and SO0668 overlap by 8 nucleotides SO0668 and SO0669 are separated by 147 nucleotides SO0669 and SO0670 are separated by 44 nucleotides
SO0667: SO0667 - conserved hypothetical protein (NCBI ptt file), at 685,179 to 686,780
SO0667
SO0668: SO0668 - prophage MuSo1, F protein, putative (NCBI ptt file), at 686,773 to 688,110
SO0668
SO0669: SO0669 - prophage MuSo1, virion morphogenesis protein (NCBI ptt file), at 688,258 to 688,710
SO0669
SO0670: SO0670 - hypothetical protein (NCBI ptt file), at 688,755 to 689,648
SO0670
Position (kb) 686
687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 685.775 kb on + strand, within SO0667 at 685.906 kb on + strand, within SO0667 at 685.911 kb on + strand, within SO0667 at 685.911 kb on + strand, within SO0667 at 685.973 kb on - strand, within SO0667 at 686.048 kb on - strand, within SO0667 at 686.084 kb on + strand, within SO0667 at 686.159 kb on - strand, within SO0667 at 686.179 kb on + strand, within SO0667 at 686.179 kb on + strand, within SO0667 at 686.179 kb on + strand, within SO0667 at 686.187 kb on - strand, within SO0667 at 686.246 kb on + strand, within SO0667 at 686.301 kb on - strand, within SO0667 at 686.342 kb on - strand, within SO0667 at 686.424 kb on + strand, within SO0667 at 686.461 kb on + strand, within SO0667 at 686.461 kb on + strand, within SO0667 at 686.469 kb on - strand, within SO0667 at 686.489 kb on + strand, within SO0667 at 686.513 kb on + strand, within SO0667 at 686.621 kb on - strand at 686.685 kb on + strand at 686.698 kb on - strand at 686.698 kb on - strand at 686.774 kb on + strand at 686.815 kb on + strand at 686.844 kb on + strand at 686.870 kb on - strand at 686.913 kb on - strand, within SO0668 at 686.938 kb on + strand, within SO0668 at 686.938 kb on + strand, within SO0668 at 686.989 kb on + strand, within SO0668 at 687.003 kb on - strand, within SO0668 at 687.012 kb on + strand, within SO0668 at 687.020 kb on - strand, within SO0668 at 687.032 kb on - strand, within SO0668 at 687.097 kb on + strand, within SO0668 at 687.303 kb on + strand, within SO0668 at 687.310 kb on + strand, within SO0668 at 687.311 kb on - strand, within SO0668 at 687.311 kb on - strand, within SO0668 at 687.354 kb on + strand, within SO0668 at 687.354 kb on + strand, within SO0668 at 687.362 kb on - strand, within SO0668 at 687.362 kb on - strand, within SO0668 at 687.362 kb on - strand, within SO0668 at 687.362 kb on - strand, within SO0668 at 687.399 kb on - strand, within SO0668 at 687.405 kb on + strand, within SO0668 at 687.441 kb on + strand, within SO0668 at 687.441 kb on + strand, within SO0668 at 687.621 kb on - strand, within SO0668 at 687.664 kb on + strand, within SO0668 at 687.722 kb on - strand, within SO0668 at 687.722 kb on - strand, within SO0668 at 687.755 kb on + strand, within SO0668 at 687.832 kb on - strand, within SO0668 at 687.897 kb on + strand, within SO0668 at 687.897 kb on + strand, within SO0668 at 687.897 kb on + strand, within SO0668 at 687.905 kb on - strand, within SO0668 at 687.905 kb on - strand, within SO0668 at 687.936 kb on + strand, within SO0668 at 687.952 kb on + strand, within SO0668 at 687.971 kb on + strand, within SO0668 at 687.971 kb on + strand, within SO0668 at 687.972 kb on + strand, within SO0668 at 687.974 kb on - strand, within SO0668 at 687.980 kb on - strand at 687.992 kb on - strand at 688.098 kb on + strand at 688.156 kb on - strand at 688.214 kb on + strand at 688.226 kb on + strand at 688.231 kb on + strand at 688.374 kb on - strand, within SO0669 at 688.420 kb on + strand, within SO0669 at 688.442 kb on - strand, within SO0669 at 688.452 kb on + strand, within SO0669 at 688.489 kb on + strand, within SO0669 at 688.499 kb on + strand, within SO0669 at 688.571 kb on - strand, within SO0669 at 688.648 kb on - strand, within SO0669 at 688.651 kb on + strand, within SO0669 at 688.659 kb on - strand, within SO0669 at 688.659 kb on - strand, within SO0669 at 688.659 kb on - strand, within SO0669 at 688.674 kb on + strand at 688.674 kb on + strand at 688.704 kb on - strand at 688.757 kb on + strand at 688.774 kb on - strand at 688.802 kb on + strand at 688.836 kb on - strand at 688.885 kb on + strand, within SO0670 at 688.894 kb on - strand, within SO0670 at 688.914 kb on + strand, within SO0670 at 688.955 kb on + strand, within SO0670 at 688.956 kb on + strand, within SO0670 at 688.956 kb on + strand, within SO0670 at 688.964 kb on - strand, within SO0670 at 688.972 kb on + strand, within SO0670 at 688.972 kb on + strand, within SO0670 at 688.999 kb on - strand, within SO0670 at 689.003 kb on + strand, within SO0670 at 689.011 kb on - strand, within SO0670
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.004 mg/ml remove 685,775 + SO0667 0.37 +0.2 685,906 + SO0667 0.45 -1.7 685,911 + SO0667 0.46 +1.0 685,911 + SO0667 0.46 -3.1 685,973 - SO0667 0.50 +0.8 686,048 - SO0667 0.54 -0.0 686,084 + SO0667 0.56 +0.6 686,159 - SO0667 0.61 -0.8 686,179 + SO0667 0.62 -0.7 686,179 + SO0667 0.62 +0.8 686,179 + SO0667 0.62 +0.9 686,187 - SO0667 0.63 -3.5 686,246 + SO0667 0.67 +0.6 686,301 - SO0667 0.70 -2.2 686,342 - SO0667 0.73 +1.2 686,424 + SO0667 0.78 +0.1 686,461 + SO0667 0.80 +0.9 686,461 + SO0667 0.80 -0.5 686,469 - SO0667 0.81 +0.6 686,489 + SO0667 0.82 -1.3 686,513 + SO0667 0.83 -0.2 686,621 - -0.7 686,685 + +1.7 686,698 - +1.1 686,698 - -2.7 686,774 + +0.1 686,815 + +0.2 686,844 + -0.6 686,870 - +0.9 686,913 - SO0668 0.10 +1.1 686,938 + SO0668 0.12 +0.8 686,938 + SO0668 0.12 -0.4 686,989 + SO0668 0.16 -1.8 687,003 - SO0668 0.17 -1.4 687,012 + SO0668 0.18 -0.0 687,020 - SO0668 0.18 -1.7 687,032 - SO0668 0.19 -1.7 687,097 + SO0668 0.24 +1.1 687,303 + SO0668 0.40 -0.6 687,310 + SO0668 0.40 -0.1 687,311 - SO0668 0.40 +0.1 687,311 - SO0668 0.40 +0.0 687,354 + SO0668 0.43 +1.3 687,354 + SO0668 0.43 -0.3 687,362 - SO0668 0.44 +1.3 687,362 - SO0668 0.44 +0.3 687,362 - SO0668 0.44 +0.8 687,362 - SO0668 0.44 -0.6 687,399 - SO0668 0.47 -0.5 687,405 + SO0668 0.47 -0.7 687,441 + SO0668 0.50 +0.8 687,441 + SO0668 0.50 +1.6 687,621 - SO0668 0.63 -3.2 687,664 + SO0668 0.67 -0.7 687,722 - SO0668 0.71 +1.0 687,722 - SO0668 0.71 +0.3 687,755 + SO0668 0.73 +0.6 687,832 - SO0668 0.79 -3.0 687,897 + SO0668 0.84 +1.7 687,897 + SO0668 0.84 +1.2 687,897 + SO0668 0.84 +1.0 687,905 - SO0668 0.85 +1.1 687,905 - SO0668 0.85 -0.4 687,936 + SO0668 0.87 -1.6 687,952 + SO0668 0.88 +0.6 687,971 + SO0668 0.90 -1.0 687,971 + SO0668 0.90 +0.4 687,972 + SO0668 0.90 +1.3 687,974 - SO0668 0.90 -1.0 687,980 - -0.3 687,992 - +0.1 688,098 + +0.9 688,156 - +0.8 688,214 + +1.0 688,226 + -0.1 688,231 + +0.1 688,374 - SO0669 0.26 +1.6 688,420 + SO0669 0.36 +0.8 688,442 - SO0669 0.41 -0.5 688,452 + SO0669 0.43 -0.0 688,489 + SO0669 0.51 -0.4 688,499 + SO0669 0.53 +0.1 688,571 - SO0669 0.69 +1.2 688,648 - SO0669 0.86 +1.1 688,651 + SO0669 0.87 -0.7 688,659 - SO0669 0.89 -1.2 688,659 - SO0669 0.89 +0.7 688,659 - SO0669 0.89 +0.1 688,674 + +1.0 688,674 + +0.5 688,704 - +1.3 688,757 + -0.1 688,774 - -0.1 688,802 + +0.8 688,836 - -1.5 688,885 + SO0670 0.15 -1.7 688,894 - SO0670 0.16 -0.1 688,914 + SO0670 0.18 -0.6 688,955 + SO0670 0.22 -0.4 688,956 + SO0670 0.22 -0.2 688,956 + SO0670 0.22 +0.6 688,964 - SO0670 0.23 -0.7 688,972 + SO0670 0.24 +0.2 688,972 + SO0670 0.24 -1.9 688,999 - SO0670 0.27 -0.5 689,003 + SO0670 0.28 +0.4 689,011 - SO0670 0.29 +1.2
Or see this region's nucleotide sequence