Experiment: Cisplatin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0660 and SO0661 are separated by 96 nucleotides SO0661 and SO0662 overlap by 4 nucleotides SO0662 and SO0663 overlap by 1 nucleotides SO0663 and SO0664 are separated by 2 nucleotides SO0664 and SO0665 overlap by 11 nucleotides SO0665 and SO0666 overlap by 1 nucleotides
SO0660: SO0660 - hypothetical protein (NCBI ptt file), at 681,154 to 681,759
SO0660
SO0661: SO0661 - zinc finger-related protein (NCBI ptt file), at 681,856 to 682,068
SO0661
SO0662: SO0662 - conserved hypothetical protein (NCBI ptt file), at 682,065 to 682,412
SO0662
SO0663: SO0663 - conserved hypothetical protein (NCBI ptt file), at 682,412 to 682,708
SO0663
SO0664: SO0664 - hypothetical protein (NCBI ptt file), at 682,711 to 682,983
SO0664
SO0665: SO0665 - conserved hypothetical protein (NCBI ptt file), at 682,973 to 683,539
SO0665
SO0666: SO0666 - prophage MuSo1, portal protein, putative (NCBI ptt file), at 683,539 to 685,179
SO0666
Position (kb) 682
683 Strain fitness (log2 ratio) -2
-1
0
1 at 681.769 kb on + strand at 681.777 kb on - strand at 681.791 kb on - strand at 681.819 kb on - strand at 681.881 kb on + strand, within SO0661 at 681.937 kb on + strand, within SO0661 at 681.951 kb on + strand, within SO0661 at 681.973 kb on - strand, within SO0661 at 682.050 kb on - strand at 682.154 kb on + strand, within SO0662 at 682.302 kb on + strand, within SO0662 at 682.405 kb on - strand at 682.505 kb on - strand, within SO0663 at 682.655 kb on + strand, within SO0663 at 682.800 kb on + strand, within SO0664 at 682.838 kb on - strand, within SO0664 at 682.865 kb on - strand, within SO0664 at 682.890 kb on + strand, within SO0664 at 683.003 kb on + strand at 683.044 kb on - strand, within SO0665 at 683.148 kb on - strand, within SO0665 at 683.173 kb on + strand, within SO0665 at 683.181 kb on - strand, within SO0665 at 683.237 kb on - strand, within SO0665 at 683.242 kb on - strand, within SO0665 at 683.340 kb on + strand, within SO0665 at 683.348 kb on - strand, within SO0665 at 683.358 kb on - strand, within SO0665 at 683.426 kb on + strand, within SO0665 at 683.483 kb on + strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.737 kb on + strand, within SO0666 at 683.770 kb on - strand, within SO0666 at 683.794 kb on - strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.954 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.004 mg/ml remove 681,769 + -0.8 681,777 - +0.8 681,791 - +0.9 681,819 - +0.2 681,881 + SO0661 0.12 +0.7 681,937 + SO0661 0.38 +1.1 681,951 + SO0661 0.45 -1.2 681,973 - SO0661 0.55 +0.5 682,050 - +1.0 682,154 + SO0662 0.26 -0.6 682,302 + SO0662 0.68 +1.0 682,405 - +0.1 682,505 - SO0663 0.31 -0.0 682,655 + SO0663 0.82 -0.6 682,800 + SO0664 0.33 -1.8 682,838 - SO0664 0.47 +0.5 682,865 - SO0664 0.56 +1.6 682,890 + SO0664 0.66 +0.1 683,003 + -0.2 683,044 - SO0665 0.13 -2.0 683,148 - SO0665 0.31 -1.3 683,173 + SO0665 0.35 +0.7 683,181 - SO0665 0.37 -0.3 683,237 - SO0665 0.47 +1.3 683,242 - SO0665 0.47 +0.1 683,340 + SO0665 0.65 -0.1 683,348 - SO0665 0.66 +0.6 683,358 - SO0665 0.68 +0.4 683,426 + SO0665 0.80 +0.6 683,483 + +0.1 683,491 - +0.7 683,491 - -0.8 683,491 - -0.8 683,737 + SO0666 0.12 +0.5 683,770 - SO0666 0.14 +0.6 683,794 - SO0666 0.16 -0.8 683,947 + SO0666 0.25 -0.7 683,947 + SO0666 0.25 +0.6 683,954 - SO0666 0.25 +1.2 683,955 - SO0666 0.25 -0.3 683,955 - SO0666 0.25 +0.2 683,955 - SO0666 0.25 +1.2
Or see this region's nucleotide sequence