Strain Fitness in Shewanella oneidensis MR-1 around SO_3843

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
3,991,090	+				-3.1
3,991,311	+		SO3842	0.29	-2.2
3,991,371	+		SO3842	0.35	-0.1
3,991,413	+		SO3842	0.39	-0.3
3,991,424	+		SO3842	0.41	-0.3
3,991,478	+		SO3842	0.46	-1.8
3,991,478	+		SO3842	0.46	-2.3
3,991,478	+		SO3842	0.46	-0.8
3,991,478	+		SO3842	0.46	+0.6
3,991,656	+		SO3842	0.65	-0.7
3,991,668	+		SO3842	0.66	-0.9
3,991,680	+		SO3842	0.67	+0.1
3,991,820	+		SO3842	0.82	-0.6
3,992,109	-				+0.2
3,992,113	+				-2.3
3,992,126	-				-2.6
3,992,166	+		SO_3843	0.14	+0.1
3,992,174	-		SO_3843	0.15	-0.7
3,992,241	+		SO_3843	0.25	-0.8
3,992,270	+		SO_3843	0.29	-0.5
3,992,395	+		SO_3843	0.47	-2.7
3,992,439	-		SO_3843	0.53	-1.4
3,992,470	+		SO_3843	0.57	-1.0
3,992,503	+		SO_3843	0.62	-1.8
3,992,511	-		SO_3843	0.63	-0.3
3,992,516	-		SO_3843	0.64	-0.9
3,992,546	-		SO_3843	0.68	-0.8
3,992,556	-		SO_3843	0.69	-1.7
3,992,563	-		SO_3843	0.70	+0.4
3,992,563	-		SO_3843	0.70	-1.3
3,992,565	+		SO_3843	0.71	-0.1
3,992,570	+		SO_3843	0.71	+0.2
3,992,573	-		SO_3843	0.72	-1.2
3,992,573	-		SO_3843	0.72	+1.4
3,992,632	-		SO_3843	0.80	+1.6
3,992,750	+				+0.4
3,992,796	+				-1.0
3,993,033	+				-0.7
3,993,065	+				+0.2
3,993,073	-				+0.5
3,993,122	-				+1.4
3,993,124	-				+0.7
3,993,130	+				+0.0
3,993,140	+				+0.6
3,993,148	-				-1.2
3,993,148	-				-0.6
3,993,222	+				-2.6
3,993,433	-		SO3844	0.16	-0.2
3,993,594	-		SO3844	0.24	+0.7
3,993,686	+		SO3844	0.28	-0.3
3,993,688	-		SO3844	0.28	+0.6
3,993,694	-		SO3844	0.28	-1.6
3,993,722	+		SO3844	0.30	-0.7
3,993,730	-		SO3844	0.30	+0.6
3,993,731	+		SO3844	0.30	-0.8
3,993,762	-		SO3844	0.32	-0.0