Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28940

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
3,035,564	+				-2.0
3,035,569	+				-0.7
3,035,572	-				-1.7
3,035,588	+				-1.4
3,035,588	+				-3.3
3,035,602	-				-3.0
3,035,676	+				-0.7
3,035,873	+		PGA1_c28940	0.18	-2.6
3,035,896	+		PGA1_c28940	0.19	-2.3
3,035,896	+		PGA1_c28940	0.19	-0.9
3,035,922	+		PGA1_c28940	0.20	-0.8
3,035,925	+		PGA1_c28940	0.20	-0.6
3,035,941	+		PGA1_c28940	0.21	-3.0
3,035,943	-		PGA1_c28940	0.21	-2.5
3,035,944	-		PGA1_c28940	0.21	-0.9
3,036,024	-		PGA1_c28940	0.25	-2.9
3,036,043	+		PGA1_c28940	0.26	-3.8
3,036,088	+		PGA1_c28940	0.29	-0.7
3,036,113	+		PGA1_c28940	0.30	-2.5
3,036,118	+		PGA1_c28940	0.30	-2.0
3,036,375	+		PGA1_c28940	0.43	-2.4
3,036,375	+		PGA1_c28940	0.43	-1.9
3,036,416	+		PGA1_c28940	0.45	-2.9
3,036,457	-		PGA1_c28940	0.48	-1.6
3,036,461	-		PGA1_c28940	0.48	-1.6
3,036,470	+		PGA1_c28940	0.48	-0.6
3,036,476	-		PGA1_c28940	0.49	-2.6
3,036,563	+		PGA1_c28940	0.53	-1.0
3,036,563	+		PGA1_c28940	0.53	-1.4
3,036,568	+		PGA1_c28940	0.53	-2.3
3,036,568	+		PGA1_c28940	0.53	-2.0
3,036,568	+		PGA1_c28940	0.53	-3.4
3,036,568	+		PGA1_c28940	0.53	-2.0
3,036,568	+		PGA1_c28940	0.53	-2.3
3,036,568	+		PGA1_c28940	0.53	-1.8
3,036,568	+		PGA1_c28940	0.53	-0.8
3,036,568	+		PGA1_c28940	0.53	-3.2
3,036,568	+		PGA1_c28940	0.53	+0.1
3,036,568	+				-0.7
3,036,568	+		PGA1_c28940	0.53	-0.9
3,036,568	+		PGA1_c28940	0.53	-2.7
3,036,568	+		PGA1_c28940	0.53	-2.5
3,036,568	+		PGA1_c28940	0.53	-1.6
3,036,568	+		PGA1_c28940	0.53	+0.4
3,036,568	+		PGA1_c28940	0.53	-2.5
3,036,568	+		PGA1_c28940	0.53	-1.4
3,036,568	+		PGA1_c28940	0.53	-1.8
3,036,568	+		PGA1_c28940	0.53	-3.0
3,036,568	+		PGA1_c28940	0.53	-2.8
3,036,568	+		PGA1_c28940	0.53	-1.8
3,036,568	+		PGA1_c28940	0.53	-1.6
3,036,568	+		PGA1_c28940	0.53	-1.5
3,036,568	+		PGA1_c28940	0.53	+0.1
3,036,568	+		PGA1_c28940	0.53	-2.2
3,036,568	+		PGA1_c28940	0.53	-0.7
3,036,568	+		PGA1_c28940	0.53	-0.8
3,036,568	+		PGA1_c28940	0.53	-1.4
3,036,568	+		PGA1_c28940	0.53	-0.9
3,036,571	-		PGA1_c28940	0.53	-0.7
3,036,576	-		PGA1_c28940	0.54	-1.8
3,036,576	-		PGA1_c28940	0.54	-0.4
3,036,576	-		PGA1_c28940	0.54	-2.8
3,036,576	-		PGA1_c28940	0.54	-1.4
3,036,576	-		PGA1_c28940	0.54	-1.5
3,036,576	-		PGA1_c28940	0.54	-1.3
3,036,576	-		PGA1_c28940	0.54	-0.8
3,036,576	-		PGA1_c28940	0.54	-0.9
3,036,576	-		PGA1_c28940	0.54	+0.1
3,036,576	-		PGA1_c28940	0.54	-2.8
3,036,576	-		PGA1_c28940	0.54	-0.1
3,036,576	-		PGA1_c28940	0.54	-0.7
3,036,576	-		PGA1_c28940	0.54	-2.9
3,036,576	-		PGA1_c28940	0.54	-0.8
3,036,576	-				-0.7
3,036,576	-		PGA1_c28940	0.54	-0.8
3,036,576	-		PGA1_c28940	0.54	-0.4
3,036,576	-		PGA1_c28940	0.54	-0.7
3,036,576	-		PGA1_c28940	0.54	-0.1
3,036,576	-		PGA1_c28940	0.54	-1.7
3,036,576	-		PGA1_c28940	0.54	-1.0
3,036,576	-		PGA1_c28940	0.54	-0.2
3,036,576	-		PGA1_c28940	0.54	+0.2
3,036,576	-		PGA1_c28940	0.54	-2.4
3,036,576	-		PGA1_c28940	0.54	-0.8
3,036,673	-		PGA1_c28940	0.59	+0.4
3,036,673	-		PGA1_c28940	0.59	-3.1
3,036,673	-		PGA1_c28940	0.59	-2.0
3,036,930	-		PGA1_c28940	0.72	-1.7
3,036,979	-		PGA1_c28940	0.74	-1.2
3,037,002	+		PGA1_c28940	0.75	-2.6
3,037,164	+		PGA1_c28940	0.84	-2.0
3,037,172	-		PGA1_c28940	0.84	-2.5
3,037,175	+		PGA1_c28940	0.84	-2.0
3,037,183	-		PGA1_c28940	0.85	-2.9
3,037,186	+		PGA1_c28940	0.85	-0.4
3,037,273	+		PGA1_c28940	0.89	-1.8
3,037,273	+		PGA1_c28940	0.89	-1.6
3,037,281	-		PGA1_c28940	0.90	-1.8
3,037,300	+				-0.4
3,037,349	+				+0.5
3,037,352	-				-0.9
3,037,463	-				+0.3
3,037,469	-				+0.0
3,037,483	+				+0.8
3,037,500	-				+0.3
3,037,583	-		PGA1_c28950	0.14	+0.9
3,037,585	+		PGA1_c28950	0.14	-0.4
3,037,601	+		PGA1_c28950	0.16	-1.7
3,037,601	+		PGA1_c28950	0.16	-0.9
3,037,609	-		PGA1_c28950	0.17	+0.2
3,037,609	-		PGA1_c28950	0.17	+0.2
3,037,614	-		PGA1_c28950	0.17	+0.6
3,037,619	-		PGA1_c28950	0.18	-1.6
3,037,624	-		PGA1_c28950	0.18	+0.3
3,037,658	+		PGA1_c28950	0.22	+0.7
3,037,721	+		PGA1_c28950	0.29	-2.3
3,037,775	-		PGA1_c28950	0.35	-2.3
3,037,838	+		PGA1_c28950	0.42	+1.6
3,037,838	+		PGA1_c28950	0.42	-0.2
3,037,846	-		PGA1_c28950	0.42	+0.5
3,037,969	+		PGA1_c28950	0.56	-1.3
3,037,979	+		PGA1_c28950	0.57	-1.0
3,037,987	-		PGA1_c28950	0.58	+0.9
3,037,989	+		PGA1_c28950	0.58	+0.5
3,038,034	+		PGA1_c28950	0.63	-1.9
3,038,166	-		PGA1_c28950	0.77	+0.5
3,038,177	-		PGA1_c28950	0.78	-0.0
3,038,209	+		PGA1_c28950	0.82	+1.8
3,038,209	+		PGA1_c28950	0.82	+0.8
3,038,209	+		PGA1_c28950	0.82	-0.4
3,038,209	+		PGA1_c28950	0.82	+0.8
3,038,215	-		PGA1_c28950	0.83	-0.9
3,038,217	+		PGA1_c28950	0.83	+1.2
3,038,217	-		PGA1_c28950	0.83	+0.1
3,038,217	-		PGA1_c28950	0.83	-1.8
3,038,217	-		PGA1_c28950	0.83	-0.2
3,038,217	-		PGA1_c28950	0.83	+0.2
3,038,225	-		PGA1_c28950	0.84	+0.4
3,038,225	-		PGA1_c28950	0.84	-0.6
3,038,225	-		PGA1_c28950	0.84	+0.3
3,038,255	-		PGA1_c28950	0.87	+0.2
3,038,285	+				-1.6
3,038,293	-				+1.3
3,038,357	-				-0.1
3,038,453	-		PGA1_c28960	0.12	-1.1