Strain Fitness in Shewanella oneidensis MR-1 around SO4270

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
4,449,090	-				-0.9
4,449,107	-				-0.5
4,449,115	-				+0.5
4,449,155	-				+0.1
4,449,161	-				-0.3
4,449,231	-				-0.2
4,449,283	-				-0.5
4,449,344	+		SO4270	0.14	-0.3
4,449,375	+		SO4270	0.18	+0.2
4,449,436	+		SO4270	0.24	-0.9
4,449,444	-		SO4270	0.25	-0.4
4,449,454	-		SO4270	0.27	-0.0
4,449,461	+		SO4270	0.27	-0.1
4,449,480	-		SO4270	0.29	+0.1
4,449,495	+		SO4270	0.31	+0.2
4,449,507	+		SO4270	0.33	-1.7
4,449,507	+		SO4270	0.33	-2.3
4,449,515	-		SO4270	0.33	-0.9
4,449,553	-		SO4270	0.38	-0.5
4,449,558	+		SO4270	0.38	-1.2
4,449,610	+		SO4270	0.44	-1.1
4,449,617	+		SO4270	0.45	-0.7
4,449,617	+		SO4270	0.45	+0.5
4,449,617	+		SO4270	0.45	-0.5
4,449,625	-		SO4270	0.46	+0.4
4,449,625	-		SO4270	0.46	-0.1
4,449,629	+		SO4270	0.46	-0.2
4,449,629	+		SO4270	0.46	-0.7
4,449,629	+		SO4270	0.46	-0.1
4,449,629	+		SO4270	0.46	-1.4
4,449,629	+		SO4270	0.46	-0.9
4,449,629	+		SO4270	0.46	-0.5
4,449,629	+		SO4270	0.46	-0.7
4,449,629	+		SO4270	0.46	-0.4
4,449,629	+		SO4270	0.46	+0.1
4,449,637	-		SO4270	0.47	+0.1
4,449,637	-		SO4270	0.47	-1.2
4,449,638	+		SO4270	0.47	+0.3
4,449,650	+		SO4270	0.49	-0.1
4,449,650	+		SO4270	0.49	-0.9
4,449,650	+		SO4270	0.49	-1.3
4,449,650	+		SO4270	0.49	+0.2
4,449,658	-		SO4270	0.50	-0.5
4,449,658	-		SO4270	0.50	+0.4
4,449,747	-		SO4270	0.60	+0.2
4,449,759	-		SO4270	0.61	+0.2
4,449,769	+		SO4270	0.62	-1.4
4,449,777	-		SO4270	0.63	+1.7
4,449,822	+		SO4270	0.68	+0.4
4,449,830	-		SO4270	0.69	-1.1
4,449,898	-		SO4270	0.77	+0.4
4,449,905	-		SO4270	0.78	-1.0
4,449,911	+		SO4270	0.78	+1.1
4,449,938	+		SO4270	0.81	-2.1
4,449,938	+		SO4270	0.81	-1.3
4,449,938	+		SO4270	0.81	+0.2
4,449,938	+		SO4270	0.81	-0.1
4,449,938	+		SO4270	0.81	-0.6
4,449,946	-		SO4270	0.82	-0.1
4,449,946	-		SO4270	0.82	+0.1
4,449,946	-		SO4270	0.82	+0.1
4,449,954	+		SO4270	0.83	-1.0
4,449,954	+		SO4270	0.83	-0.3
4,449,954	+		SO4270	0.83	-1.5
4,449,954	+		SO4270	0.83	-1.2
4,449,955	+		SO4270	0.83	-0.5
4,449,962	-		SO4270	0.84	-1.8
4,449,962	-		SO4270	0.84	-0.1
4,450,014	+				+0.1
4,450,021	-				-0.6
4,450,065	+				-0.1
4,450,067	+				+0.1
4,450,078	+				-0.0
4,450,140	+				-0.8
4,450,150	+				-0.1
4,450,158	-				-0.3
4,450,293	+				-0.2
4,450,301	-				-0.4
4,450,365	-				+0.1
4,450,365	-				-0.4
4,450,381	+				+0.9
4,450,514	+		SO4275.1	0.22	+0.4
4,450,516	-		SO4275.1	0.22	-0.4
4,450,522	-		SO4275.1	0.24	-0.2
4,450,522	-		SO4275.1	0.24	+0.4
4,450,522	-		SO4275.1	0.24	-0.4
4,450,522	-		SO4275.1	0.24	-0.8
4,450,522	-		SO4275.1	0.24	+0.7
4,450,556	+		SO4275.1	0.31	+0.2
4,450,598	+		SO4275.1	0.41	-0.1
4,450,710	+		SO4275.1	0.67	+0.0
4,450,743	+		SO4275.1	0.74	+0.1
4,450,751	-		SO4275.1	0.76	-0.6
4,450,754	+		SO4275.1	0.77	+0.4
4,450,764	+		SO4275.1	0.79	-0.2
4,450,846	+				-1.6
4,450,854	-				+0.5
4,450,900	-				+0.1
4,450,920	-				+0.9
4,450,958	+				-0.1
4,450,958	+				-0.0
4,450,959	+				-0.3
4,450,992	+		SO_4271	0.11	-0.9
4,451,000	-		SO_4271	0.14	-1.5
4,451,000	-		SO_4271	0.14	-0.8
4,451,018	+		SO_4271	0.21	+0.1