Strain Fitness in Shewanella oneidensis MR-1 around SO4249

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
4,425,358	-	radC	SO4248	0.12	-1.6
4,425,443	+	radC	SO4248	0.25	+0.2
4,425,478	-	radC	SO4248	0.30	-0.3
4,425,494	+	radC	SO4248	0.32	-1.5
4,425,547	+	radC	SO4248	0.40	-1.4
4,425,584	+	radC	SO4248	0.45	-0.6
4,425,584	+	radC	SO4248	0.45	-1.3
4,425,584	+	radC	SO4248	0.45	-0.4
4,425,592	-	radC	SO4248	0.47	-2.3
4,425,592	-	radC	SO4248	0.47	-0.2
4,425,592	-	radC	SO4248	0.47	-0.4
4,425,658	+	radC	SO4248	0.56	+1.3
4,425,703	+	radC	SO4248	0.63	-1.1
4,425,711	-	radC	SO4248	0.64	+0.7
4,425,818	+	radC	SO4248	0.80	-0.1
4,425,818	+	radC	SO4248	0.80	-0.2
4,425,826	-	radC	SO4248	0.81	-0.6
4,425,826	-	radC	SO4248	0.81	+0.2
4,425,850	-	radC	SO4248	0.85	+0.8
4,425,907	+				-1.2
4,425,920	+				+0.0
4,425,928	-				-0.2
4,425,934	+				+0.1
4,427,375	+	dut	SO4250	0.16	-1.1
4,427,514	+	dut	SO4250	0.46	-0.9
4,427,514	+	dut	SO4250	0.46	-0.4
4,427,514	+	dut	SO4250	0.46	-0.1
4,427,514	+	dut	SO4250	0.46	-1.8
4,427,514	+	dut	SO4250	0.46	-1.3
4,427,519	+	dut	SO4250	0.47	-0.4
4,427,522	-	dut	SO4250	0.48	-2.2
4,427,522	-	dut	SO4250	0.48	+0.3
4,427,522	-	dut	SO4250	0.48	-1.6
4,427,546	-	dut	SO4250	0.53	-2.3
4,427,622	+	dut	SO4250	0.69	-0.1
4,427,665	-	dut	SO4250	0.79	-1.2
4,427,791	-				-3.1
4,427,795	+				-1.5
4,427,840	-				-0.8
4,427,840	-				-0.5
4,427,863	+		SO4251	0.12	-1.8
4,427,908	+		SO4251	0.19	-1.4
4,427,993	+		SO4251	0.34	-1.4
4,428,036	+		SO4251	0.41	-0.6
4,428,057	+		SO4251	0.44	-0.4
4,428,232	-		SO4251	0.74	-2.0
4,428,252	+		SO4251	0.77	-1.5