Strain Fitness in Shewanella oneidensis MR-1 around SO4173

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
4,344,264	+		SO4171	0.22	-1.4
4,344,455	-		SO4171	0.62	+0.7
4,344,484	+		SO4171	0.68	+0.3
4,344,484	+		SO4171	0.68	+0.7
4,344,484	+		SO4171	0.68	-1.1
4,344,484	+		SO4171	0.68	-0.7
4,344,492	-		SO4171	0.70	+0.2
4,344,492	-		SO4171	0.70	-0.3
4,344,492	-		SO4171	0.70	-0.1
4,344,492	-		SO4171	0.70	+0.1
4,344,573	-		SO4171	0.87	-0.6
4,344,573	-		SO4171	0.87	-0.3
4,344,610	+				+0.8
4,344,613	+				+0.3
4,344,618	-				+0.1
4,344,618	-				+1.1
4,344,618	-				+0.5
4,344,618	-				+1.1
4,344,682	+				-1.0
4,344,727	-		SO4172	0.11	-0.2
4,344,729	+		SO4172	0.11	+0.1
4,344,729	-		SO4172	0.11	-1.1
4,344,761	-		SO4172	0.17	-0.9
4,344,770	+		SO4172	0.19	+1.0
4,344,770	+		SO4172	0.19	-0.2
4,344,773	-		SO4172	0.19	+0.0
4,344,876	-		SO4172	0.38	+0.0
4,344,893	+		SO4172	0.41	-0.1
4,345,070	+		SO4172	0.73	+0.0
4,345,079	-		SO4172	0.75	-0.2
4,345,340	-				-0.4
4,345,354	+		SO4173	0.11	+0.0
4,345,355	+		SO4173	0.11	+0.4
4,345,363	-		SO4173	0.12	+0.3
4,345,456	-		SO4173	0.19	+0.9
4,345,482	+		SO4173	0.21	+0.8
4,345,597	+		SO4173	0.30	-0.1
4,345,605	-		SO4173	0.30	+1.1
4,345,799	+		SO4173	0.45	+0.9
4,345,809	-		SO4173	0.46	-0.4
4,345,809	-		SO4173	0.46	+1.2
4,345,853	-		SO4173	0.50	-0.4
4,345,853	-		SO4173	0.50	-0.8
4,345,890	+		SO4173	0.53	+1.8
4,345,942	-		SO4173	0.57	-0.5
4,345,969	-		SO4173	0.59	+0.3
4,345,989	+		SO4173	0.60	-0.3
4,345,999	+		SO4173	0.61	+0.7
4,346,007	-		SO4173	0.62	+0.6
4,346,032	+		SO4173	0.64	+0.1
4,346,040	-		SO4173	0.64	-0.1
4,346,061	+		SO4173	0.66	+2.6
4,346,134	+		SO4173	0.71	-0.2
4,346,142	-		SO4173	0.72	+1.3
4,346,268	+		SO4173	0.82	-2.0
4,346,309	-		SO4173	0.85	+0.8
4,346,311	+		SO4173	0.85	-0.3
4,346,319	-		SO4173	0.86	-0.4
4,346,431	+				-0.0
4,346,431	+				-0.1
4,346,431	+				+1.4
4,346,439	-				+0.1
4,346,439	-				-0.3
4,346,440	-				-0.2
4,346,447	-				+2.6
4,346,457	-				-0.1
4,346,498	+				-0.4
4,346,505	+				-0.2
4,346,519	-				-2.1
4,346,540	-				-0.3
4,346,559	+				+0.6
4,346,560	+				-1.8
4,346,567	-				-0.2
4,346,568	-				+0.2
4,346,628	-		SO4174	0.14	-1.0
4,346,687	+		SO4174	0.20	-0.5
4,346,706	+		SO4174	0.22	-0.6
4,346,719	-		SO4174	0.24	+1.0
4,346,735	+		SO4174	0.26	+0.7
4,346,767	+		SO4174	0.29	+0.0
4,346,775	-		SO4174	0.30	-1.1
4,346,860	+		SO4174	0.39	-0.0
4,346,887	-		SO4174	0.42	-1.8
4,346,913	+		SO4174	0.45	+2.6
4,346,959	+		SO4174	0.50	+1.1
4,347,019	-		SO4174	0.56	-0.1
4,347,077	-		SO4174	0.63	-0.9
4,347,077	-		SO4174	0.63	-1.4
4,347,111	+		SO4174	0.66	+0.3
4,347,116	+		SO4174	0.67	+0.2
4,347,134	+		SO4174	0.69	-0.9
4,347,134	+		SO4174	0.69	+0.0
4,347,134	+				+0.6
4,347,201	+		SO4174	0.76	+2.3
4,347,206	+		SO4174	0.77	+1.1
4,347,209	-		SO4174	0.77	+0.1
4,347,224	-		SO4174	0.79	+0.7
4,347,226	+		SO4174	0.79	-2.4
4,347,319	+		SO4174	0.89	+0.3
4,347,424	+				+1.0
4,347,432	+				-0.3