Strain Fitness in Shewanella oneidensis MR-1 around SO4152

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
4,326,188	-				+0.9
4,326,255	+		SO4151	0.12	+0.3
4,326,260	+		SO4151	0.13	+0.3
4,326,319	+		SO4151	0.19	+0.5
4,326,395	+		SO4151	0.26	+0.8
4,326,432	+		SO4151	0.30	-1.2
4,326,432	+		SO4151	0.30	-1.0
4,326,440	-		SO4151	0.31	+0.6
4,326,440	-		SO4151	0.31	+0.9
4,326,440	-		SO4151	0.31	+0.2
4,326,517	+		SO4151	0.38	-0.2
4,326,520	-		SO4151	0.39	+0.7
4,326,612	-		SO4151	0.48	+0.6
4,326,612	-		SO4151	0.48	+0.6
4,326,704	+		SO4151	0.57	-0.3
4,326,740	+		SO4151	0.61	+1.2
4,326,763	+		SO4151	0.63	-0.1
4,326,864	+		SO4151	0.73	+0.4
4,326,864	+		SO4151	0.73	-0.2
4,326,872	-		SO4151	0.74	-0.1
4,326,929	-		SO4151	0.79	-0.5
4,326,929	-		SO4151	0.79	+0.2
4,326,989	+		SO4151	0.85	-0.2
4,327,060	+				-1.5
4,327,060	+				+0.2
4,327,060	+				+1.1
4,327,068	-				+0.4
4,327,074	-				-0.4
4,327,201	-		SO4152	0.11	+0.5
4,327,230	-		SO4152	0.15	-0.2
4,327,289	+		SO4152	0.24	-1.0
4,327,385	-		SO4152	0.39	+0.9
4,327,400	+		SO4152	0.42	+1.2
4,327,408	-		SO4152	0.43	+0.5
4,327,429	+		SO4152	0.46	+1.2
4,327,489	-		SO4152	0.55	-0.4
4,327,493	+		SO4152	0.56	+2.3
4,327,501	-		SO4152	0.57	+1.0
4,327,528	+		SO4152	0.61	+0.7
4,327,528	+		SO4152	0.61	+0.1
4,327,536	-		SO4152	0.63	-0.5
4,327,555	+		SO4152	0.66	-0.3
4,327,596	+		SO4152	0.72	-0.0
4,327,596	+		SO4152	0.72	+0.6
4,327,596	+		SO4152	0.72	+0.4
4,327,596	+		SO4152	0.72	-1.5
4,327,596	+		SO4152	0.72	-0.1
4,327,596	+		SO4152	0.72	+0.5
4,327,604	-		SO4152	0.73	+1.1
4,327,604	-		SO4152	0.73	+1.6
4,327,611	-		SO4152	0.74	+1.2
4,327,611	-		SO4152	0.74	+1.2
4,327,611	-		SO4152	0.74	+1.1
4,327,611	-		SO4152	0.74	-1.1
4,327,630	+		SO4152	0.77	+0.2
4,327,638	-		SO4152	0.78	+0.1
4,327,648	-		SO4152	0.80	+0.6
4,327,648	-		SO4152	0.80	+0.6
4,327,690	+		SO4152	0.87	-0.1
4,327,690	+		SO4152	0.87	-0.6
4,327,690	+		SO4152	0.87	+0.1
4,327,698	+		SO4152	0.88	+0.6
4,327,698	+		SO4152	0.88	-0.4
4,327,698	-		SO4152	0.88	+0.1
4,327,721	-				+0.3
4,327,776	-				+0.0
4,327,925	+		SO4153	0.13	-1.1
4,327,950	+		SO4153	0.15	+1.6
4,328,099	-		SO4153	0.28	-0.6
4,328,142	-		SO4153	0.32	-0.4
4,328,142	-		SO4153	0.32	-0.3
4,328,216	+		SO4153	0.39	+1.3
4,328,279	+		SO4153	0.44	+0.9
4,328,474	+		SO4153	0.61	+0.5
4,328,482	-		SO4153	0.62	+0.1
4,328,482	-		SO4153	0.62	+0.7
4,328,536	-		SO4153	0.67	+1.0
4,328,755	-		SO4153	0.86	-0.7