Strain Fitness in Shewanella oneidensis MR-1 around SO2941

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
3,079,502	+		SO2940	0.76	+1.8
3,079,504	+		SO2940	0.76	+2.1
3,079,512	-		SO2940	0.76	+1.9
3,079,512	-		SO2940	0.76	+2.3
3,079,610	+		SO2940	0.79	+1.5
3,079,668	-		SO2940	0.80	+1.3
3,079,781	-		SO2940	0.83	+1.6
3,079,971	+		SO2940	0.88	+2.1
3,079,971	+		SO2940	0.88	-0.5
3,079,971	+		SO2940	0.88	+2.6
3,079,971	+		SO2940	0.88	+1.0
3,079,979	-		SO2940	0.88	+1.7
3,080,045	-		SO2940	0.89	-0.7
3,080,082	-				+2.2
3,080,098	+				-0.1
3,080,098	+				+1.8
3,080,106	-				+2.2
3,080,106	-				+1.8
3,080,128	+				+2.0
3,080,128	+				+1.2
3,080,136	-				+2.3
3,080,271	+				+1.5
3,080,315	-				+1.5
3,080,357	-				+1.5
3,080,657	+		SO2941	0.29	+1.8
3,080,664	-		SO2941	0.30	+2.1
3,080,665	+		SO2941	0.30	+2.2
3,080,673	-		SO2941	0.32	+1.4
3,080,713	+		SO2941	0.38	+2.0
3,080,713	+		SO2941	0.38	+2.2
3,080,734	+		SO2941	0.41	+1.0
3,080,749	+		SO2941	0.44	+1.6
3,080,750	+		SO2941	0.44	+2.4
3,080,767	-		SO2941	0.47	+1.3
3,080,799	-		SO2941	0.52	+2.2
3,080,891	-		SO2941	0.66	+2.6
3,081,054	+				+1.4
3,081,087	+				+2.3
3,081,098	+				+2.2
3,081,106	-				+2.5
3,081,205	+				+1.0
3,081,223	+				+2.2
3,081,237	+		SO2942	0.10	+0.8
3,081,259	+		SO2942	0.14	+2.0
3,081,271	+		SO2942	0.16	+2.2
3,081,279	-		SO2942	0.18	+2.2
3,081,393	+		SO2942	0.38	+2.1
3,081,667	+		SO2942	0.86	+0.4
3,081,667	+		SO2942	0.86	+2.4
3,081,779	+				+2.2
3,081,793	+				+2.9
3,081,793	+				+2.1
3,081,843	-				+2.1
3,081,859	-		SO2943	0.14	+1.5
3,081,916	+		SO2943	0.36	+2.1
3,081,948	+		SO2943	0.48	+2.4
3,082,040	-		SO2943	0.84	+2.3
3,082,056	+				+1.4
3,082,062	+				+2.2