Strain Fitness in Shewanella oneidensis MR-1 around SO2690

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
2,809,636	+		SO2688	0.27	+1.0
2,809,702	+		SO2688	0.37	+1.3
2,809,702	+		SO2688	0.37	+1.1
2,809,710	-		SO2688	0.38	+1.2
2,809,710	-		SO2688	0.38	+1.3
2,809,766	-		SO2688	0.46	+0.7
2,809,771	-		SO2688	0.47	-0.0
2,809,906	-		SO2688	0.68	+1.4
2,809,911	-		SO2688	0.68	+1.4
2,810,028	-		SO2688	0.86	+0.7
2,810,039	+		SO2688	0.88	+0.1
2,810,069	-				+1.2
2,810,105	-				+1.1
2,810,169	+				+1.1
2,810,178	-				+1.0
2,810,310	+		SO2689	0.37	+0.3
2,810,313	-		SO2689	0.38	+1.2
2,810,315	+		SO2689	0.38	+1.2
2,810,324	-		SO2689	0.40	+0.8
2,810,336	-		SO2689	0.43	+1.7
2,810,541	-				+1.9
2,810,541	-				+1.6
2,810,595	-				+1.2
2,810,607	-				-0.8
2,810,610	-				+0.9
2,810,610	-				+2.3
2,810,630	-				+1.1
2,810,630	-				+1.2
2,810,633	-				+0.4
2,810,645	-				-0.1
2,810,666	+				+0.7
2,810,674	+				+1.4
2,810,767	+		SO2690	0.26	+1.1
2,810,784	+		SO2690	0.30	+1.1
2,810,817	-		SO2690	0.36	+0.2
2,810,840	+		SO2690	0.41	+0.7
2,810,887	+		SO2690	0.50	+1.0
2,810,887	+		SO2690	0.50	+0.6
2,810,895	-		SO2690	0.52	+1.0
2,810,895	-		SO2690	0.52	-1.0
2,810,957	+		SO2690	0.64	+0.7
2,810,975	+		SO2690	0.68	+0.0
2,810,975	+		SO2690	0.68	+0.7
2,810,983	-		SO2690	0.70	+1.2
2,810,983	-		SO2690	0.70	+1.3
2,811,086	+				-0.7
2,811,105	-				+0.4
2,811,132	+				+1.6
2,811,152	+				+0.9
2,811,172	-				+1.2
2,811,214	+		SO2691	0.14	+0.3
2,811,356	-		SO2691	0.38	+1.2
2,811,480	+		SO2691	0.59	+1.4
2,811,502	+		SO2691	0.63	+1.4
2,811,632	+		SO2691	0.85	+1.1
2,811,671	-				+1.8
2,811,849	+		SO2692	0.68	+1.1
2,811,978	+				+1.2
2,811,989	-				+0.7
2,812,055	+		SO2693	0.10	+1.7
2,812,062	-		SO2693	0.11	+0.7
2,812,063	-		SO2693	0.11	+1.9
2,812,127	+		SO2693	0.15	+1.8
2,812,127	+		SO2693	0.15	+1.2
2,812,127	+		SO2693	0.15	+1.4
2,812,127	+		SO2693	0.15	+1.1