Strain Fitness in Shewanella oneidensis MR-1 around SO2678

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
2,800,825	+		SO2675	0.82	+1.7
2,800,825	+		SO2675	0.82	+1.6
2,800,833	-		SO2675	0.85	+2.5
2,800,914	+				+0.7
2,800,922	-		SO2676	0.12	+1.2
2,801,118	+		SO2676	0.79	+2.0
2,801,136	+		SO2676	0.86	+1.2
2,801,136	+		SO2676	0.86	+0.8
2,801,144	-		SO2676	0.88	+0.6
2,801,144	-		SO2676	0.88	+1.3
2,801,171	+				+0.8
2,801,179	-				+0.4
2,801,432	+		SO2677	0.42	+1.0
2,801,432	+		SO2677	0.42	+0.8
2,801,472	-		SO2677	0.49	+0.5
2,801,501	+		SO2677	0.54	-0.3
2,801,526	-		SO2677	0.58	+0.4
2,801,839	+		SO2678	0.36	+0.6
2,801,855	+		SO2678	0.45	+0.2
2,801,924	+		SO2678	0.80	+1.4
2,802,003	-				+1.5
2,802,012	+				+1.0
2,802,068	-				+2.1
2,802,072	+				+1.1
2,802,080	-				+2.8
2,802,122	-		SO2679	0.10	+0.1
2,802,122	-		SO2679	0.10	+1.5
2,802,201	+		SO2679	0.15	-0.0
2,802,208	+		SO2679	0.16	+0.2
2,802,313	+		SO2679	0.22	+1.7
2,802,321	-		SO2679	0.23	+1.0
2,802,357	+		SO2679	0.25	+0.2
2,802,440	+		SO2679	0.30	+1.1
2,802,448	-		SO2679	0.31	+0.8
2,802,448	-		SO2679	0.31	+1.7
2,802,475	+		SO2679	0.33	+0.2
2,802,554	-		SO2679	0.38	+1.5
2,802,630	-		SO2679	0.43	+1.1
2,802,664	+		SO2679	0.45	+1.1
2,802,742	-		SO2679	0.50	+1.6
2,802,848	+		SO2679	0.57	+0.9
2,802,869	+		SO2679	0.58	+2.1
2,802,886	+		SO2679	0.59	+0.4
2,802,929	+		SO2679	0.62	+0.8
2,802,945	+		SO2679	0.63	+1.3
2,802,946	+		SO2679	0.63	+1.5