Strain Fitness in Shewanella oneidensis MR-1 around SO2221

Experiment: Cisplatin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.002 mg/ml
2,334,638	-		SO2219	0.29	+0.9
2,334,644	-		SO2219	0.31	+0.0
2,334,685	-		SO2219	0.43	-1.1
2,334,789	-		SO2219	0.73	+1.0
2,334,913	+				+1.1
2,334,918	+				-0.4
2,335,000	+		SO2220	0.18	-0.1
2,335,013	-		SO2220	0.20	-1.1
2,335,257	-		SO2220	0.61	+1.6
2,335,378	+		SO2220	0.82	-0.1
2,335,438	+				+0.4
2,335,438	+				+1.8
2,335,446	-				+0.5
2,335,618	+				-2.8
2,335,689	+	pabB	SO2221	0.13	+0.1
2,335,899	-	pabB	SO2221	0.28	-2.2
2,336,217	-	pabB	SO2221	0.50	+0.8
2,336,321	+	pabB	SO2221	0.58	+0.9
2,336,550	+	pabB	SO2221	0.74	+1.5
2,336,558	-	pabB	SO2221	0.75	+0.1
2,336,580	-	pabB	SO2221	0.76	-0.3
2,336,587	+	pabB	SO2221	0.77	-0.5
2,336,597	+	pabB	SO2221	0.77	+0.9
2,336,610	+	pabB	SO2221	0.78	+0.9
2,336,708	-	pabB	SO2221	0.85	-0.2
2,336,821	-				+0.1
2,336,849	+				-0.2