Experiment: Cisplatin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0663 and SO0664 are separated by 2 nucleotides SO0664 and SO0665 overlap by 11 nucleotides SO0665 and SO0666 overlap by 1 nucleotides SO0666 and SO0667 overlap by 1 nucleotides
SO0663: SO0663 - conserved hypothetical protein (NCBI ptt file), at 682,412 to 682,708
SO0663
SO0664: SO0664 - hypothetical protein (NCBI ptt file), at 682,711 to 682,983
SO0664
SO0665: SO0665 - conserved hypothetical protein (NCBI ptt file), at 682,973 to 683,539
SO0665
SO0666: SO0666 - prophage MuSo1, portal protein, putative (NCBI ptt file), at 683,539 to 685,179
SO0666
SO0667: SO0667 - conserved hypothetical protein (NCBI ptt file), at 685,179 to 686,780
SO0667
Position (kb) 683
684
685
686 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 682.655 kb on + strand, within SO0663 at 682.800 kb on + strand, within SO0664 at 682.838 kb on - strand, within SO0664 at 682.865 kb on - strand, within SO0664 at 682.890 kb on + strand, within SO0664 at 683.003 kb on + strand at 683.044 kb on - strand, within SO0665 at 683.148 kb on - strand, within SO0665 at 683.173 kb on + strand, within SO0665 at 683.181 kb on - strand, within SO0665 at 683.237 kb on - strand, within SO0665 at 683.242 kb on - strand, within SO0665 at 683.340 kb on + strand, within SO0665 at 683.348 kb on - strand, within SO0665 at 683.358 kb on - strand, within SO0665 at 683.426 kb on + strand, within SO0665 at 683.483 kb on + strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.737 kb on + strand, within SO0666 at 683.770 kb on - strand, within SO0666 at 683.794 kb on - strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.954 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 684.067 kb on + strand, within SO0666 at 684.067 kb on + strand, within SO0666 at 684.081 kb on + strand, within SO0666 at 684.089 kb on - strand, within SO0666 at 684.113 kb on + strand, within SO0666 at 684.121 kb on - strand, within SO0666 at 684.199 kb on + strand, within SO0666 at 684.234 kb on - strand, within SO0666 at 684.277 kb on + strand, within SO0666 at 684.293 kb on - strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.396 kb on + strand, within SO0666 at 684.431 kb on + strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.454 kb on - strand, within SO0666 at 684.461 kb on - strand, within SO0666 at 684.498 kb on + strand, within SO0666 at 684.506 kb on - strand, within SO0666 at 684.506 kb on - strand, within SO0666 at 684.516 kb on - strand, within SO0666 at 684.552 kb on + strand, within SO0666 at 684.560 kb on - strand, within SO0666 at 684.611 kb on + strand, within SO0666 at 684.723 kb on - strand, within SO0666 at 684.732 kb on - strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.815 kb on + strand, within SO0666 at 684.823 kb on - strand, within SO0666 at 684.823 kb on - strand, within SO0666 at 684.823 kb on - strand, within SO0666 at 684.823 kb on - strand, within SO0666 at 684.946 kb on - strand, within SO0666 at 685.103 kb on - strand at 685.110 kb on - strand at 685.228 kb on + strand at 685.228 kb on + strand at 685.236 kb on - strand at 685.236 kb on - strand at 685.236 kb on - strand at 685.236 kb on - strand at 685.236 kb on - strand at 685.243 kb on + strand at 685.276 kb on + strand at 685.318 kb on + strand at 685.327 kb on - strand at 685.344 kb on + strand, within SO0667 at 685.432 kb on + strand, within SO0667 at 685.474 kb on + strand, within SO0667 at 685.511 kb on + strand, within SO0667 at 685.599 kb on + strand, within SO0667 at 685.622 kb on - strand, within SO0667 at 685.623 kb on - strand, within SO0667 at 685.638 kb on + strand, within SO0667 at 685.682 kb on - strand, within SO0667 at 685.711 kb on + strand, within SO0667 at 685.775 kb on + strand, within SO0667 at 685.906 kb on + strand, within SO0667 at 685.911 kb on + strand, within SO0667 at 685.911 kb on + strand, within SO0667 at 685.973 kb on - strand, within SO0667 at 686.048 kb on - strand, within SO0667 at 686.084 kb on + strand, within SO0667 at 686.159 kb on - strand, within SO0667 at 686.179 kb on + strand, within SO0667 at 686.179 kb on + strand, within SO0667 at 686.179 kb on + strand, within SO0667
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.002 mg/ml remove 682,655 + SO0663 0.82 +0.3 682,800 + SO0664 0.33 +0.1 682,838 - SO0664 0.47 +0.2 682,865 - SO0664 0.56 +0.8 682,890 + SO0664 0.66 +1.3 683,003 + -0.8 683,044 - SO0665 0.13 -1.1 683,148 - SO0665 0.31 +1.2 683,173 + SO0665 0.35 -0.4 683,181 - SO0665 0.37 +0.2 683,237 - SO0665 0.47 +0.2 683,242 - SO0665 0.47 -0.3 683,340 + SO0665 0.65 -0.5 683,348 - SO0665 0.66 -1.0 683,358 - SO0665 0.68 -0.1 683,426 + SO0665 0.80 +0.2 683,483 + -0.0 683,491 - +0.1 683,491 - -3.2 683,491 - -0.2 683,737 + SO0666 0.12 +0.2 683,770 - SO0666 0.14 +0.3 683,794 - SO0666 0.16 -0.0 683,947 + SO0666 0.25 -0.8 683,947 + SO0666 0.25 -0.4 683,954 - SO0666 0.25 +1.5 683,955 - SO0666 0.25 +0.2 683,955 - SO0666 0.25 +1.3 683,955 - SO0666 0.25 -0.4 684,067 + SO0666 0.32 +0.2 684,067 + SO0666 0.32 +0.7 684,081 + SO0666 0.33 -0.2 684,089 - SO0666 0.34 +0.0 684,113 + SO0666 0.35 -0.6 684,121 - SO0666 0.35 -0.2 684,199 + SO0666 0.40 +0.9 684,234 - SO0666 0.42 +0.6 684,277 + SO0666 0.45 -0.6 684,293 - SO0666 0.46 -0.1 684,321 + SO0666 0.48 +0.4 684,321 + SO0666 0.48 -0.5 684,321 + SO0666 0.48 +0.6 684,321 + SO0666 0.48 +0.4 684,396 + SO0666 0.52 +0.7 684,431 + SO0666 0.54 -0.7 684,439 - SO0666 0.55 +0.9 684,439 - SO0666 0.55 -0.0 684,439 - SO0666 0.55 +1.4 684,439 - SO0666 0.55 -0.0 684,454 - SO0666 0.56 -0.3 684,461 - SO0666 0.56 +0.2 684,498 + SO0666 0.58 -0.6 684,506 - SO0666 0.59 -0.3 684,506 - SO0666 0.59 +0.3 684,516 - SO0666 0.60 +0.6 684,552 + SO0666 0.62 -0.2 684,560 - SO0666 0.62 -1.1 684,611 + SO0666 0.65 -0.2 684,723 - SO0666 0.72 -0.4 684,732 - SO0666 0.73 +0.5 684,815 + SO0666 0.78 -1.0 684,815 + SO0666 0.78 +0.8 684,815 + SO0666 0.78 +0.0 684,815 + SO0666 0.78 +0.0 684,815 + SO0666 0.78 +0.5 684,815 + SO0666 0.78 +0.9 684,823 - SO0666 0.78 +1.0 684,823 - SO0666 0.78 +1.2 684,823 - SO0666 0.78 +0.2 684,823 - SO0666 0.78 +0.7 684,946 - SO0666 0.86 +0.1 685,103 - -0.7 685,110 - +0.0 685,228 + +0.6 685,228 + +0.2 685,236 - -0.3 685,236 - -0.0 685,236 - +0.1 685,236 - -0.0 685,236 - -0.7 685,243 + -0.3 685,276 + +0.1 685,318 + +0.6 685,327 - +0.1 685,344 + SO0667 0.10 -0.1 685,432 + SO0667 0.16 +0.1 685,474 + SO0667 0.18 -2.2 685,511 + SO0667 0.21 +0.2 685,599 + SO0667 0.26 +1.2 685,622 - SO0667 0.28 +2.2 685,623 - SO0667 0.28 +1.1 685,638 + SO0667 0.29 +0.8 685,682 - SO0667 0.31 -0.3 685,711 + SO0667 0.33 -0.7 685,775 + SO0667 0.37 -0.9 685,906 + SO0667 0.45 -0.0 685,911 + SO0667 0.46 +0.5 685,911 + SO0667 0.46 -0.9 685,973 - SO0667 0.50 +0.4 686,048 - SO0667 0.54 -0.4 686,084 + SO0667 0.56 -0.3 686,159 - SO0667 0.61 -0.0 686,179 + SO0667 0.62 -0.8 686,179 + SO0667 0.62 +0.1 686,179 + SO0667 0.62 +1.4
Or see this region's nucleotide sequence