Experiment: Cobalt chloride 0.055 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO3150 and SO3151 are separated by 100 nucleotides SO3151 and SO3152 are separated by 0 nucleotides SO3152 and proS are separated by 255 nucleotides
SO3150: SO3150 - lipoprotein, putative (NCBI ptt file), at 3,287,769 to 3,288,149
SO3150
SO3151: SO3151 - conserved hypothetical protein (NCBI ptt file), at 3,288,250 to 3,288,984
SO3151
SO3152: SO3152 - acetyltransferase, CysE/LacA/LpxA/NodL family (NCBI ptt file), at 3,288,985 to 3,289,614
SO3152
SO3154: proS - prolyl-tRNA synthetase (NCBI ptt file), at 3,289,870 to 3,291,582
proS
Position (kb)
3288
3289
3290 Strain fitness (log2 ratio)
-2
-1
0
1 at 3288.084 kb on + strand, within SO3150 at 3288.092 kb on - strand, within SO3150 at 3288.356 kb on - strand, within SO3151 at 3288.389 kb on - strand, within SO3151 at 3288.465 kb on - strand, within SO3151 at 3288.736 kb on + strand, within SO3151 at 3288.789 kb on - strand, within SO3151 at 3288.807 kb on + strand, within SO3151 at 3289.084 kb on + strand, within SO3152 at 3289.102 kb on - strand, within SO3152 at 3289.103 kb on - strand, within SO3152 at 3289.121 kb on + strand, within SO3152 at 3289.136 kb on - strand, within SO3152 at 3289.232 kb on + strand, within SO3152 at 3289.238 kb on - strand, within SO3152 at 3289.530 kb on - strand, within SO3152 at 3289.535 kb on - strand, within SO3152 at 3289.562 kb on - strand at 3289.654 kb on + strand at 3289.662 kb on - strand at 3289.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.055 mM remove 3,288,084 + SO3150 0.83 -0.7 3,288,092 - SO3150 0.85 -0.9 3,288,356 - SO3151 0.14 +0.8 3,288,389 - SO3151 0.19 +0.4 3,288,465 - SO3151 0.29 -0.9 3,288,736 + SO3151 0.66 -0.7 3,288,789 - SO3151 0.73 +0.1 3,288,807 + SO3151 0.76 -0.8 3,289,084 + SO3152 0.16 -0.5 3,289,102 - SO3152 0.19 +0.1 3,289,103 - SO3152 0.19 -1.8 3,289,121 + SO3152 0.22 +0.7 3,289,136 - SO3152 0.24 -0.3 3,289,232 + SO3152 0.39 -0.9 3,289,238 - SO3152 0.40 -1.2 3,289,530 - SO3152 0.87 -0.3 3,289,535 - SO3152 0.87 -0.3 3,289,562 - +0.3 3,289,654 + -0.5 3,289,662 - +0.7 3,289,672 - -2.5
Or see this region's nucleotide sequence