Strain Fitness in Marinobacter adhaerens HP15 around HP15_70

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_69 and HP15_70 are separated by 12 nucleotides HP15_69: HP15_69 - hypothetical protein, at 78,075 to 78,182 _69 HP15_70: HP15_70 - conserved hypothetical protein, at 78,195 to 78,506 _70 Position (kb) 78 79Strain fitness (log2 ratio) -1 0 1 2at 77.331 kb on - strandat 77.353 kb on + strandat 77.378 kb on - strandat 77.379 kb on + strandat 77.478 kb on - strandat 77.565 kb on + strandat 77.594 kb on + strandat 77.607 kb on - strandat 77.639 kb on + strandat 77.667 kb on + strandat 77.782 kb on - strandat 77.839 kb on + strandat 77.892 kb on + strandat 77.957 kb on - strandat 78.061 kb on - strandat 78.071 kb on - strandat 78.071 kb on - strandat 78.071 kb on - strandat 78.077 kb on - strandat 78.082 kb on + strandat 78.110 kb on - strand, within HP15_69at 78.164 kb on + strand, within HP15_69at 78.330 kb on + strand, within HP15_70at 78.330 kb on + strand, within HP15_70at 78.357 kb on + strand, within HP15_70at 78.359 kb on - strand, within HP15_70at 78.365 kb on - strand, within HP15_70at 78.377 kb on - strand, within HP15_70at 78.398 kb on + strand, within HP15_70at 78.585 kb on + strandat 78.593 kb on - strandat 78.610 kb on - strandat 78.625 kb on - strandat 78.640 kb on + strandat 78.648 kb on - strandat 78.680 kb on - strandat 78.699 kb on + strandat 78.710 kb on + strandat 78.732 kb on - strandat 78.797 kb on - strandat 78.902 kb on + strandat 78.940 kb on - strandat 78.958 kb on - strandat 79.020 kb on - strandat 79.032 kb on + strandat 79.089 kb on + strandat 79.101 kb on + strandat 79.157 kb on + strandat 79.239 kb on + strandat 79.247 kb on - strandat 79.256 kb on - strandat 79.274 kb on + strandat 79.274 kb on + strandat 79.277 kb on - strandat 79.329 kb on - strandat 79.354 kb on - strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.389 kb on - strandat 79.421 kb on - strandat 79.421 kb on - strandat 79.498 kb on + strandat 79.506 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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77,331 - -0.6
77,353 + -0.5
77,378 - -0.3
77,379 + -0.4
77,478 - -1.1
77,565 + +0.2
77,594 + -0.7
77,607 - -0.5
77,639 + -0.8
77,667 + -0.0
77,782 - +0.2
77,839 + -0.8
77,892 + +2.2
77,957 - -0.9
78,061 - +1.8
78,071 - -0.2
78,071 - +1.2
78,071 - +1.7
78,077 - -0.4
78,082 + -0.0
78,110 - HP15_69 0.32 +1.0
78,164 + HP15_69 0.82 -0.4
78,330 + HP15_70 0.43 -0.8
78,330 + HP15_70 0.43 +1.7
78,357 + HP15_70 0.52 -1.0
78,359 - HP15_70 0.53 +1.6
78,365 - HP15_70 0.54 +1.6
78,377 - HP15_70 0.58 -0.5
78,398 + HP15_70 0.65 -0.8
78,585 + +2.0
78,593 - +1.4
78,610 - -0.5
78,625 - -0.5
78,640 + -0.9
78,648 - -0.4
78,680 - -0.2
78,699 + +1.7
78,710 + +1.2
78,732 - +1.2
78,797 - +1.7
78,902 + +1.8
78,940 - -0.5
78,958 - -0.4
79,020 - +1.8
79,032 + -0.1
79,089 + -1.3
79,101 + -0.6
79,157 + -0.1
79,239 + +1.6
79,247 - -0.4
79,256 - +0.6
79,274 + -0.2
79,274 + +2.4
79,277 - -0.6
79,329 - -1.2
79,354 - -0.3
79,381 + -0.5
79,381 + -0.3
79,381 + +1.6
79,381 + -1.0
79,389 - +0.2
79,421 - +0.1
79,421 - +2.2
79,498 + +1.0
79,506 - -0.6

Or see this region's nucleotide sequence