Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g78 and HP15_p187g79 are separated by 379 nucleotides HP15_p187g79 and HP15_p187g80 are separated by 119 nucleotides
HP15_p187g78: HP15_p187g78 - conserved hypothetical protein, secreted, at 72,109 to 75,369
_p187g78
HP15_p187g79: HP15_p187g79 - conserved hypothetical protein, at 75,749 to 76,516
_p187g79
HP15_p187g80: HP15_p187g80 - hypothetical protein, at 76,636 to 78,234
_p187g80
Position (kb) 75
76
77 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 74.752 kb on + strand, within HP15_p187g78 at 74.752 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.757 kb on + strand, within HP15_p187g78 at 74.762 kb on + strand, within HP15_p187g78 at 74.762 kb on + strand, within HP15_p187g78 at 74.762 kb on + strand, within HP15_p187g78 at 74.762 kb on + strand, within HP15_p187g78 at 74.762 kb on + strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.765 kb on - strand, within HP15_p187g78 at 74.768 kb on - strand, within HP15_p187g78 at 74.770 kb on - strand, within HP15_p187g78 at 74.770 kb on - strand, within HP15_p187g78 at 74.770 kb on - strand, within HP15_p187g78 at 74.770 kb on - strand, within HP15_p187g78 at 74.807 kb on + strand, within HP15_p187g78 at 74.815 kb on - strand, within HP15_p187g78 at 74.835 kb on - strand, within HP15_p187g78 at 74.863 kb on + strand, within HP15_p187g78 at 74.864 kb on - strand, within HP15_p187g78 at 74.873 kb on + strand, within HP15_p187g78 at 74.881 kb on + strand, within HP15_p187g78 at 74.881 kb on + strand, within HP15_p187g78 at 74.881 kb on + strand, within HP15_p187g78 at 74.889 kb on - strand, within HP15_p187g78 at 74.890 kb on - strand, within HP15_p187g78 at 74.890 kb on - strand, within HP15_p187g78 at 74.910 kb on + strand, within HP15_p187g78 at 74.917 kb on - strand, within HP15_p187g78 at 74.936 kb on - strand, within HP15_p187g78 at 74.946 kb on + strand, within HP15_p187g78 at 74.946 kb on + strand, within HP15_p187g78 at 74.954 kb on - strand, within HP15_p187g78 at 74.954 kb on - strand, within HP15_p187g78 at 74.954 kb on - strand, within HP15_p187g78 at 74.954 kb on - strand, within HP15_p187g78 at 74.959 kb on - strand, within HP15_p187g78 at 74.960 kb on + strand, within HP15_p187g78 at 74.960 kb on + strand, within HP15_p187g78 at 74.968 kb on - strand, within HP15_p187g78 at 74.968 kb on - strand, within HP15_p187g78 at 74.989 kb on - strand, within HP15_p187g78 at 74.991 kb on - strand, within HP15_p187g78 at 74.996 kb on + strand, within HP15_p187g78 at 74.996 kb on + strand, within HP15_p187g78 at 75.004 kb on - strand, within HP15_p187g78 at 75.004 kb on - strand, within HP15_p187g78 at 75.004 kb on - strand, within HP15_p187g78 at 75.011 kb on - strand, within HP15_p187g78 at 75.016 kb on - strand, within HP15_p187g78 at 75.078 kb on - strand at 75.094 kb on - strand at 75.101 kb on + strand at 75.101 kb on - strand at 75.109 kb on - strand at 75.151 kb on + strand at 75.201 kb on + strand at 75.201 kb on + strand at 75.209 kb on - strand at 75.209 kb on - strand at 75.222 kb on + strand at 75.230 kb on - strand at 75.244 kb on - strand at 75.270 kb on - strand at 75.310 kb on + strand at 75.313 kb on - strand at 75.373 kb on + strand at 75.464 kb on + strand at 75.470 kb on - strand at 75.486 kb on - strand at 75.498 kb on + strand at 75.506 kb on - strand at 75.508 kb on + strand at 75.508 kb on + strand at 75.516 kb on - strand at 75.516 kb on - strand at 75.536 kb on - strand at 75.565 kb on - strand at 75.709 kb on + strand at 75.717 kb on - strand at 75.840 kb on - strand, within HP15_p187g79 at 75.876 kb on + strand, within HP15_p187g79 at 75.876 kb on + strand, within HP15_p187g79 at 75.876 kb on + strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.884 kb on - strand, within HP15_p187g79 at 75.987 kb on - strand, within HP15_p187g79 at 75.987 kb on - strand, within HP15_p187g79 at 75.989 kb on - strand, within HP15_p187g79 at 76.024 kb on - strand, within HP15_p187g79 at 76.058 kb on + strand, within HP15_p187g79 at 76.066 kb on - strand, within HP15_p187g79 at 76.068 kb on + strand, within HP15_p187g79 at 76.068 kb on + strand, within HP15_p187g79 at 76.096 kb on + strand, within HP15_p187g79 at 76.137 kb on - strand, within HP15_p187g79 at 76.202 kb on + strand, within HP15_p187g79 at 76.207 kb on + strand, within HP15_p187g79 at 76.207 kb on + strand, within HP15_p187g79 at 76.210 kb on - strand, within HP15_p187g79 at 76.210 kb on - strand, within HP15_p187g79 at 76.215 kb on - strand, within HP15_p187g79 at 76.217 kb on + strand, within HP15_p187g79 at 76.345 kb on - strand, within HP15_p187g79 at 76.370 kb on - strand, within HP15_p187g79 at 76.372 kb on + strand, within HP15_p187g79 at 76.385 kb on - strand, within HP15_p187g79 at 76.396 kb on + strand, within HP15_p187g79 at 76.396 kb on + strand, within HP15_p187g79 at 76.436 kb on + strand, within HP15_p187g79 at 76.454 kb on - strand at 76.454 kb on - strand at 76.571 kb on - strand at 76.572 kb on - strand at 76.613 kb on - strand at 76.643 kb on + strand at 76.643 kb on + strand at 76.648 kb on + strand at 76.651 kb on - strand at 76.653 kb on + strand at 76.660 kb on + strand at 76.661 kb on - strand at 76.668 kb on + strand at 76.668 kb on + strand at 76.676 kb on - strand at 76.676 kb on - strand at 76.676 kb on - strand at 76.676 kb on - strand at 76.771 kb on + strand at 76.779 kb on - strand at 76.789 kb on + strand at 76.789 kb on + strand at 76.797 kb on - strand, within HP15_p187g80 at 76.797 kb on - strand, within HP15_p187g80 at 76.833 kb on - strand, within HP15_p187g80 at 76.872 kb on - strand, within HP15_p187g80 at 76.909 kb on + strand, within HP15_p187g80 at 76.912 kb on + strand, within HP15_p187g80 at 76.930 kb on + strand, within HP15_p187g80 at 76.938 kb on - strand, within HP15_p187g80 at 76.938 kb on - strand, within HP15_p187g80 at 76.948 kb on - strand, within HP15_p187g80 at 76.980 kb on + strand, within HP15_p187g80 at 76.994 kb on + strand, within HP15_p187g80 at 77.028 kb on + strand, within HP15_p187g80 at 77.069 kb on + strand, within HP15_p187g80 at 77.075 kb on + strand, within HP15_p187g80 at 77.077 kb on + strand, within HP15_p187g80 at 77.083 kb on - strand, within HP15_p187g80 at 77.085 kb on + strand, within HP15_p187g80 at 77.090 kb on - strand, within HP15_p187g80 at 77.097 kb on + strand, within HP15_p187g80 at 77.114 kb on + strand, within HP15_p187g80 at 77.205 kb on - strand, within HP15_p187g80 at 77.242 kb on - strand, within HP15_p187g80 at 77.282 kb on - strand, within HP15_p187g80 at 77.298 kb on + strand, within HP15_p187g80 at 77.306 kb on - strand, within HP15_p187g80 at 77.308 kb on + strand, within HP15_p187g80 at 77.308 kb on + strand, within HP15_p187g80 at 77.316 kb on - strand, within HP15_p187g80 at 77.367 kb on + strand, within HP15_p187g80 at 77.367 kb on + strand, within HP15_p187g80 at 77.367 kb on + strand, within HP15_p187g80 at 77.367 kb on + strand, within HP15_p187g80 at 77.367 kb on + strand, within HP15_p187g80 at 77.376 kb on - strand, within HP15_p187g80 at 77.463 kb on - strand, within HP15_p187g80 at 77.463 kb on - strand, within HP15_p187g80 at 77.493 kb on + strand, within HP15_p187g80 at 77.493 kb on + strand, within HP15_p187g80 at 77.493 kb on + strand, within HP15_p187g80 at 77.493 kb on - strand, within HP15_p187g80 at 77.501 kb on - strand, within HP15_p187g80
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 74,752 + HP15_p187g78 0.81 +1.8 74,752 + HP15_p187g78 0.81 -0.8 74,757 + HP15_p187g78 0.81 +1.7 74,757 + HP15_p187g78 0.81 +1.7 74,757 + HP15_p187g78 0.81 -2.2 74,757 + HP15_p187g78 0.81 +1.1 74,757 + HP15_p187g78 0.81 +1.1 74,757 + HP15_p187g78 0.81 -0.4 74,762 + HP15_p187g78 0.81 +1.5 74,762 + HP15_p187g78 0.81 +1.8 74,762 + HP15_p187g78 0.81 -1.0 74,762 + HP15_p187g78 0.81 -0.4 74,762 + HP15_p187g78 0.81 -0.1 74,765 - HP15_p187g78 0.81 +1.9 74,765 - HP15_p187g78 0.81 +1.2 74,765 - HP15_p187g78 0.81 +0.3 74,765 - HP15_p187g78 0.81 -0.3 74,765 - HP15_p187g78 0.81 +1.9 74,765 - HP15_p187g78 0.81 +1.9 74,768 - HP15_p187g78 0.82 -0.5 74,770 - HP15_p187g78 0.82 +1.5 74,770 - HP15_p187g78 0.82 +0.5 74,770 - HP15_p187g78 0.82 -0.3 74,770 - HP15_p187g78 0.82 +1.7 74,807 + HP15_p187g78 0.83 +1.5 74,815 - HP15_p187g78 0.83 -0.5 74,835 - HP15_p187g78 0.84 +1.5 74,863 + HP15_p187g78 0.84 +2.2 74,864 - HP15_p187g78 0.84 -0.8 74,873 + HP15_p187g78 0.85 -0.1 74,881 + HP15_p187g78 0.85 +1.6 74,881 + HP15_p187g78 0.85 -0.1 74,881 + HP15_p187g78 0.85 +0.9 74,889 - HP15_p187g78 0.85 +0.1 74,890 - HP15_p187g78 0.85 +1.0 74,890 - HP15_p187g78 0.85 +1.6 74,910 + HP15_p187g78 0.86 -0.6 74,917 - HP15_p187g78 0.86 -0.5 74,936 - HP15_p187g78 0.87 -1.1 74,946 + HP15_p187g78 0.87 -0.0 74,946 + HP15_p187g78 0.87 -0.2 74,954 - HP15_p187g78 0.87 -0.2 74,954 - HP15_p187g78 0.87 +1.3 74,954 - HP15_p187g78 0.87 +1.9 74,954 - HP15_p187g78 0.87 -0.5 74,959 - HP15_p187g78 0.87 +0.8 74,960 + HP15_p187g78 0.87 +1.7 74,960 + HP15_p187g78 0.87 +0.4 74,968 - HP15_p187g78 0.88 +0.4 74,968 - HP15_p187g78 0.88 -0.9 74,989 - HP15_p187g78 0.88 -0.4 74,991 - HP15_p187g78 0.88 +0.2 74,996 + HP15_p187g78 0.89 +2.1 74,996 + HP15_p187g78 0.89 +1.5 75,004 - HP15_p187g78 0.89 -1.1 75,004 - HP15_p187g78 0.89 -0.2 75,004 - HP15_p187g78 0.89 -0.9 75,011 - HP15_p187g78 0.89 +1.0 75,016 - HP15_p187g78 0.89 -0.6 75,078 - -0.5 75,094 - -0.9 75,101 + +1.7 75,101 - -0.6 75,109 - -0.7 75,151 + +2.1 75,201 + -0.7 75,201 + +0.1 75,209 - +1.4 75,209 - +0.1 75,222 + -0.9 75,230 - -0.5 75,244 - -1.1 75,270 - +0.6 75,310 + -0.2 75,313 - +1.0 75,373 + +1.0 75,464 + +0.4 75,470 - -0.1 75,486 - +1.3 75,498 + -0.3 75,506 - +0.7 75,508 + -0.8 75,508 + -1.3 75,516 - -0.7 75,516 - +0.9 75,536 - +0.1 75,565 - +0.1 75,709 + +1.6 75,717 - +1.6 75,840 - HP15_p187g79 0.12 -1.1 75,876 + HP15_p187g79 0.17 -2.9 75,876 + HP15_p187g79 0.17 -2.1 75,876 + HP15_p187g79 0.17 -2.8 75,884 - HP15_p187g79 0.18 -2.5 75,884 - HP15_p187g79 0.18 -3.2 75,884 - HP15_p187g79 0.18 -1.5 75,884 - HP15_p187g79 0.18 -1.7 75,884 - HP15_p187g79 0.18 -2.0 75,884 - HP15_p187g79 0.18 -3.3 75,884 - HP15_p187g79 0.18 -4.0 75,884 - HP15_p187g79 0.18 -2.3 75,884 - HP15_p187g79 0.18 -1.4 75,987 - HP15_p187g79 0.31 -2.0 75,987 - HP15_p187g79 0.31 -2.1 75,989 - HP15_p187g79 0.31 -1.7 76,024 - HP15_p187g79 0.36 -0.2 76,058 + HP15_p187g79 0.40 +0.1 76,066 - HP15_p187g79 0.41 -1.7 76,068 + HP15_p187g79 0.42 -1.4 76,068 + HP15_p187g79 0.42 -0.0 76,096 + HP15_p187g79 0.45 -1.6 76,137 - HP15_p187g79 0.51 -1.3 76,202 + HP15_p187g79 0.59 -1.9 76,207 + HP15_p187g79 0.60 -1.2 76,207 + HP15_p187g79 0.60 -1.8 76,210 - HP15_p187g79 0.60 -1.5 76,210 - HP15_p187g79 0.60 -1.5 76,215 - HP15_p187g79 0.61 -3.1 76,217 + HP15_p187g79 0.61 -2.2 76,345 - HP15_p187g79 0.78 +0.5 76,370 - HP15_p187g79 0.81 -0.6 76,372 + HP15_p187g79 0.81 -3.4 76,385 - HP15_p187g79 0.83 -2.5 76,396 + HP15_p187g79 0.84 +0.3 76,396 + HP15_p187g79 0.84 -2.5 76,436 + HP15_p187g79 0.89 -3.3 76,454 - -1.2 76,454 - -2.0 76,571 - -2.0 76,572 - -0.6 76,613 - -0.9 76,643 + +2.4 76,643 + +0.7 76,648 + +1.5 76,651 - +0.9 76,653 + +0.1 76,660 + +0.3 76,661 - +0.7 76,668 + -1.1 76,668 + -1.2 76,676 - +1.9 76,676 - +0.2 76,676 - +0.1 76,676 - +0.8 76,771 + -0.2 76,779 - -0.5 76,789 + +1.1 76,789 + -0.9 76,797 - HP15_p187g80 0.10 +1.6 76,797 - HP15_p187g80 0.10 +1.8 76,833 - HP15_p187g80 0.12 -0.1 76,872 - HP15_p187g80 0.15 -0.4 76,909 + HP15_p187g80 0.17 +1.3 76,912 + HP15_p187g80 0.17 +1.6 76,930 + HP15_p187g80 0.18 +1.7 76,938 - HP15_p187g80 0.19 +0.2 76,938 - HP15_p187g80 0.19 -0.6 76,948 - HP15_p187g80 0.20 -1.1 76,980 + HP15_p187g80 0.22 -0.0 76,994 + HP15_p187g80 0.22 +1.4 77,028 + HP15_p187g80 0.25 +2.4 77,069 + HP15_p187g80 0.27 +1.8 77,075 + HP15_p187g80 0.27 +1.8 77,077 + HP15_p187g80 0.28 -0.3 77,083 - HP15_p187g80 0.28 +0.9 77,085 + HP15_p187g80 0.28 +1.7 77,090 - HP15_p187g80 0.28 -0.3 77,097 + HP15_p187g80 0.29 -1.1 77,114 + HP15_p187g80 0.30 -2.7 77,205 - HP15_p187g80 0.36 +1.7 77,242 - HP15_p187g80 0.38 -0.6 77,282 - HP15_p187g80 0.40 +1.9 77,298 + HP15_p187g80 0.41 -0.4 77,306 - HP15_p187g80 0.42 +0.2 77,308 + HP15_p187g80 0.42 +0.1 77,308 + HP15_p187g80 0.42 +1.3 77,316 - HP15_p187g80 0.43 +1.7 77,367 + HP15_p187g80 0.46 -0.8 77,367 + HP15_p187g80 0.46 -0.2 77,367 + HP15_p187g80 0.46 +0.6 77,367 + HP15_p187g80 0.46 -0.4 77,367 + HP15_p187g80 0.46 +0.9 77,376 - HP15_p187g80 0.46 -1.6 77,463 - HP15_p187g80 0.52 +1.3 77,463 - HP15_p187g80 0.52 -0.5 77,493 + HP15_p187g80 0.54 -0.0 77,493 + HP15_p187g80 0.54 +1.2 77,493 + HP15_p187g80 0.54 +1.5 77,493 - HP15_p187g80 0.54 -0.8 77,501 - HP15_p187g80 0.54 -0.3
Or see this region's nucleotide sequence