Strain Fitness in Marinobacter adhaerens HP15 around HP15_2591

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2590 and HP15_2591 overlap by 4 nucleotidesHP15_2591 and HP15_2592 are separated by 9 nucleotidesHP15_2592 and HP15_2593 overlap by 8 nucleotidesHP15_2593 and HP15_2594 are separated by 70 nucleotides HP15_2590: HP15_2590 - monovalent cation/H+ antiporter subunit D, at 2,739,736 to 2,741,250 _2590 HP15_2591: HP15_2591 - monovalent cation/H+ antiporter subunit E, at 2,741,247 to 2,741,720 _2591 HP15_2592: HP15_2592 - multiple resistance and pH regulation protein F, at 2,741,730 to 2,742,002 _2592 HP15_2593: HP15_2593 - monovalent cation/proton antiporter, MnhG/PhaG subunit, at 2,741,995 to 2,742,402 _2593 HP15_2594: HP15_2594 - hypothetical protein, at 2,742,473 to 2,742,754 _2594 Position (kb) 2741 2742Strain fitness (log2 ratio) -1 0 1 2at 2740.262 kb on + strand, within HP15_2590at 2740.280 kb on - strand, within HP15_2590at 2740.318 kb on + strand, within HP15_2590at 2740.328 kb on + strand, within HP15_2590at 2740.338 kb on - strand, within HP15_2590at 2740.346 kb on - strand, within HP15_2590at 2740.484 kb on + strand, within HP15_2590at 2740.484 kb on + strand, within HP15_2590at 2740.499 kb on - strand, within HP15_2590at 2740.529 kb on - strand, within HP15_2590at 2740.561 kb on - strand, within HP15_2590at 2740.563 kb on - strand, within HP15_2590at 2740.563 kb on - strand, within HP15_2590at 2740.563 kb on - strand, within HP15_2590at 2740.671 kb on + strand, within HP15_2590at 2740.793 kb on + strand, within HP15_2590at 2740.807 kb on + strand, within HP15_2590at 2740.911 kb on + strand, within HP15_2590at 2741.000 kb on - strand, within HP15_2590at 2741.211 kb on + strandat 2741.258 kb on + strandat 2741.593 kb on + strand, within HP15_2591at 2741.666 kb on + strand, within HP15_2591at 2741.674 kb on - strandat 2741.696 kb on - strandat 2741.804 kb on - strand, within HP15_2592at 2741.809 kb on + strand, within HP15_2592at 2741.833 kb on - strand, within HP15_2592at 2741.898 kb on + strand, within HP15_2592at 2742.151 kb on + strand, within HP15_2593at 2742.159 kb on - strand, within HP15_2593at 2742.334 kb on - strand, within HP15_2593at 2742.359 kb on - strand, within HP15_2593at 2742.395 kb on - strandat 2742.460 kb on - strandat 2742.508 kb on - strand, within HP15_2594at 2742.526 kb on + strand, within HP15_2594at 2742.528 kb on + strand, within HP15_2594at 2742.554 kb on - strand, within HP15_2594at 2742.621 kb on + strand, within HP15_2594at 2742.637 kb on - strand, within HP15_2594at 2742.642 kb on + strand, within HP15_2594

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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2,740,262 + HP15_2590 0.35 +0.3
2,740,280 - HP15_2590 0.36 +0.0
2,740,318 + HP15_2590 0.38 +0.2
2,740,328 + HP15_2590 0.39 +1.1
2,740,338 - HP15_2590 0.40 -1.2
2,740,346 - HP15_2590 0.40 +0.7
2,740,484 + HP15_2590 0.49 -0.7
2,740,484 + HP15_2590 0.49 -0.4
2,740,499 - HP15_2590 0.50 +2.1
2,740,529 - HP15_2590 0.52 -0.0
2,740,561 - HP15_2590 0.54 -0.4
2,740,563 - HP15_2590 0.55 +0.2
2,740,563 - HP15_2590 0.55 +1.6
2,740,563 - HP15_2590 0.55 -0.2
2,740,671 + HP15_2590 0.62 +1.3
2,740,793 + HP15_2590 0.70 -0.6
2,740,807 + HP15_2590 0.71 -0.4
2,740,911 + HP15_2590 0.78 +0.2
2,741,000 - HP15_2590 0.83 -0.7
2,741,211 + -1.7
2,741,258 + -0.2
2,741,593 + HP15_2591 0.73 -0.7
2,741,666 + HP15_2591 0.88 -0.7
2,741,674 - +0.4
2,741,696 - -0.6
2,741,804 - HP15_2592 0.27 -0.1
2,741,809 + HP15_2592 0.29 +0.1
2,741,833 - HP15_2592 0.38 -1.1
2,741,898 + HP15_2592 0.62 -1.1
2,742,151 + HP15_2593 0.38 +0.4
2,742,159 - HP15_2593 0.40 -0.1
2,742,334 - HP15_2593 0.83 +1.5
2,742,359 - HP15_2593 0.89 +1.6
2,742,395 - -0.7
2,742,460 - -0.3
2,742,508 - HP15_2594 0.12 -0.2
2,742,526 + HP15_2594 0.19 +1.5
2,742,528 + HP15_2594 0.20 -0.7
2,742,554 - HP15_2594 0.29 +1.6
2,742,621 + HP15_2594 0.52 -0.4
2,742,637 - HP15_2594 0.58 -0.7
2,742,642 + HP15_2594 0.60 +0.9

Or see this region's nucleotide sequence