Strain Fitness in Marinobacter adhaerens HP15 around HP15_2495

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2494 and HP15_2495 are separated by 83 nucleotidesHP15_2495 and HP15_2496 are separated by 174 nucleotides HP15_2494: HP15_2494 - adenlyosuccinate synthase, at 2,633,015 to 2,634,310 _2494 HP15_2495: HP15_2495 - tRNA synthetase, class II (G, H, P and S), at 2,634,394 to 2,635,575 _2495 HP15_2496: HP15_2496 - HflC, at 2,635,750 to 2,636,607 _2496 Position (kb) 2634 2635 2636Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2634.605 kb on - strand, within HP15_2495at 2634.605 kb on - strand, within HP15_2495at 2634.605 kb on - strand, within HP15_2495at 2634.697 kb on - strand, within HP15_2495at 2634.741 kb on - strand, within HP15_2495at 2634.835 kb on - strand, within HP15_2495at 2634.863 kb on - strand, within HP15_2495at 2634.867 kb on - strand, within HP15_2495at 2635.183 kb on - strand, within HP15_2495at 2635.185 kb on - strand, within HP15_2495at 2635.245 kb on - strand, within HP15_2495at 2635.507 kb on - strandat 2635.747 kb on + strandat 2635.755 kb on - strandat 2635.953 kb on + strand, within HP15_2496at 2636.179 kb on + strand, within HP15_2496at 2636.187 kb on - strand, within HP15_2496at 2636.498 kb on - strand, within HP15_2496at 2636.516 kb on + strand, within HP15_2496

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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2,634,605 - HP15_2495 0.18 +1.4
2,634,605 - HP15_2495 0.18 -4.0
2,634,605 - HP15_2495 0.18 -0.3
2,634,697 - HP15_2495 0.26 -3.4
2,634,741 - HP15_2495 0.29 -2.8
2,634,835 - HP15_2495 0.37 -4.6
2,634,863 - HP15_2495 0.40 -1.8
2,634,867 - HP15_2495 0.40 -1.8
2,635,183 - HP15_2495 0.67 -1.8
2,635,185 - HP15_2495 0.67 -3.2
2,635,245 - HP15_2495 0.72 -1.7
2,635,507 - -2.6
2,635,747 + -0.3
2,635,755 - -0.7
2,635,953 + HP15_2496 0.24 +1.2
2,636,179 + HP15_2496 0.50 +1.1
2,636,187 - HP15_2496 0.51 +0.2
2,636,498 - HP15_2496 0.87 -0.2
2,636,516 + HP15_2496 0.89 -1.0

Or see this region's nucleotide sequence