Strain Fitness in Marinobacter adhaerens HP15 around HP15_1163

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1162 and HP15_1163 overlap by 4 nucleotidesHP15_1163 and HP15_1164 are separated by 0 nucleotidesHP15_1164 and HP15_1166 are separated by 159 nucleotides HP15_1162: HP15_1162 - aminotransferase, class I and II, at 1,194,079 to 1,195,281 _1162 HP15_1163: HP15_1163 - [protein-PII] uridylyltransferase, at 1,195,278 to 1,197,923 _1163 HP15_1164: HP15_1164 - methionine aminopeptidase, type I, at 1,197,924 to 1,198,694 _1164 HP15_1166: HP15_1166 - hypothetical protein, at 1,198,854 to 1,198,991 _1166 Position (kb) 1195 1196 1197 1198Strain fitness (log2 ratio) -2 -1 0 1 2at 1194.582 kb on - strand, within HP15_1162at 1194.636 kb on + strand, within HP15_1162at 1194.858 kb on - strand, within HP15_1162at 1194.930 kb on + strand, within HP15_1162at 1194.957 kb on - strand, within HP15_1162at 1195.087 kb on - strand, within HP15_1162at 1195.700 kb on + strand, within HP15_1163at 1195.708 kb on - strand, within HP15_1163at 1195.715 kb on + strand, within HP15_1163at 1195.802 kb on - strand, within HP15_1163at 1196.067 kb on + strand, within HP15_1163at 1196.075 kb on + strand, within HP15_1163at 1196.086 kb on + strand, within HP15_1163at 1196.120 kb on - strand, within HP15_1163at 1196.157 kb on - strand, within HP15_1163at 1196.279 kb on + strand, within HP15_1163at 1196.697 kb on - strand, within HP15_1163at 1196.936 kb on + strand, within HP15_1163at 1197.011 kb on - strand, within HP15_1163at 1197.011 kb on - strand, within HP15_1163at 1197.073 kb on - strand, within HP15_1163at 1197.225 kb on + strand, within HP15_1163at 1197.233 kb on - strand, within HP15_1163at 1197.240 kb on + strand, within HP15_1163at 1197.406 kb on + strand, within HP15_1163at 1197.406 kb on + strand, within HP15_1163at 1197.429 kb on - strand, within HP15_1163at 1197.429 kb on - strand, within HP15_1163at 1197.450 kb on + strand, within HP15_1163at 1197.568 kb on - strand, within HP15_1163at 1197.710 kb on - strandat 1197.778 kb on + strandat 1197.786 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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1,194,582 - HP15_1162 0.42 -0.6
1,194,636 + HP15_1162 0.46 +1.7
1,194,858 - HP15_1162 0.65 -0.0
1,194,930 + HP15_1162 0.71 +1.4
1,194,957 - HP15_1162 0.73 +1.5
1,195,087 - HP15_1162 0.84 -0.6
1,195,700 + HP15_1163 0.16 -0.6
1,195,708 - HP15_1163 0.16 +1.3
1,195,715 + HP15_1163 0.17 -1.3
1,195,802 - HP15_1163 0.20 -0.6
1,196,067 + HP15_1163 0.30 -1.9
1,196,075 + HP15_1163 0.30 -0.8
1,196,086 + HP15_1163 0.31 -0.8
1,196,120 - HP15_1163 0.32 -0.6
1,196,157 - HP15_1163 0.33 -1.0
1,196,279 + HP15_1163 0.38 -0.4
1,196,697 - HP15_1163 0.54 -1.3
1,196,936 + HP15_1163 0.63 -0.6
1,197,011 - HP15_1163 0.65 -0.7
1,197,011 - HP15_1163 0.65 -0.0
1,197,073 - HP15_1163 0.68 -1.8
1,197,225 + HP15_1163 0.74 -1.9
1,197,233 - HP15_1163 0.74 -1.2
1,197,240 + HP15_1163 0.74 -1.6
1,197,406 + HP15_1163 0.80 -1.8
1,197,406 + HP15_1163 0.80 -0.3
1,197,429 - HP15_1163 0.81 +1.1
1,197,429 - HP15_1163 0.81 -1.5
1,197,450 + HP15_1163 0.82 +1.8
1,197,568 - HP15_1163 0.87 -0.5
1,197,710 - +0.7
1,197,778 + +1.2
1,197,786 - +0.8

Or see this region's nucleotide sequence