Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g150 and HP15_p187g151 are separated by 443 nucleotides HP15_p187g151 and HP15_p187g152 are separated by 303 nucleotides
HP15_p187g150: HP15_p187g150 - transcriptional regulator, AraC family protein, at 150,399 to 151,430
_p187g150
HP15_p187g151: HP15_p187g151 - conserved hypothetical protein, at 151,874 to 153,103
_p187g151
HP15_p187g152: HP15_p187g152 - hypothetical protein, at 153,407 to 154,279
_p187g152
Position (kb) 151
152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 150.881 kb on - strand, within HP15_p187g150 at 150.881 kb on - strand, within HP15_p187g150 at 150.892 kb on - strand, within HP15_p187g150 at 150.895 kb on + strand, within HP15_p187g150 at 150.916 kb on - strand, within HP15_p187g150 at 150.927 kb on + strand, within HP15_p187g150 at 151.055 kb on - strand, within HP15_p187g150 at 151.060 kb on + strand, within HP15_p187g150 at 151.156 kb on - strand, within HP15_p187g150 at 151.175 kb on + strand, within HP15_p187g150 at 151.178 kb on - strand, within HP15_p187g150 at 151.183 kb on - strand, within HP15_p187g150 at 151.183 kb on - strand, within HP15_p187g150 at 151.196 kb on + strand, within HP15_p187g150 at 151.196 kb on + strand, within HP15_p187g150 at 151.208 kb on + strand, within HP15_p187g150 at 151.221 kb on - strand, within HP15_p187g150 at 151.248 kb on - strand, within HP15_p187g150 at 151.396 kb on + strand at 151.398 kb on - strand at 151.401 kb on + strand at 151.480 kb on + strand at 151.544 kb on + strand at 151.577 kb on + strand at 151.589 kb on + strand at 151.598 kb on - strand at 151.607 kb on + strand at 151.633 kb on + strand at 151.633 kb on + strand at 151.633 kb on + strand at 151.641 kb on - strand at 151.641 kb on - strand at 151.641 kb on - strand at 151.641 kb on - strand at 151.712 kb on + strand at 151.742 kb on + strand at 151.750 kb on - strand at 151.782 kb on - strand at 151.813 kb on - strand at 151.885 kb on - strand at 152.072 kb on + strand, within HP15_p187g151 at 152.072 kb on + strand, within HP15_p187g151 at 152.077 kb on + strand, within HP15_p187g151 at 152.077 kb on + strand, within HP15_p187g151 at 152.077 kb on + strand, within HP15_p187g151 at 152.080 kb on - strand, within HP15_p187g151 at 152.085 kb on - strand, within HP15_p187g151 at 152.103 kb on - strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.187 kb on + strand, within HP15_p187g151 at 152.194 kb on - strand, within HP15_p187g151 at 152.194 kb on - strand, within HP15_p187g151 at 152.195 kb on - strand, within HP15_p187g151 at 152.201 kb on - strand, within HP15_p187g151 at 152.239 kb on - strand, within HP15_p187g151 at 152.252 kb on + strand, within HP15_p187g151 at 152.252 kb on + strand, within HP15_p187g151 at 152.252 kb on + strand, within HP15_p187g151 at 152.260 kb on - strand, within HP15_p187g151 at 152.260 kb on - strand, within HP15_p187g151 at 152.260 kb on - strand, within HP15_p187g151 at 152.260 kb on - strand, within HP15_p187g151 at 152.270 kb on - strand, within HP15_p187g151 at 152.278 kb on - strand, within HP15_p187g151 at 152.278 kb on - strand, within HP15_p187g151 at 152.286 kb on - strand, within HP15_p187g151 at 152.313 kb on + strand, within HP15_p187g151 at 152.317 kb on + strand, within HP15_p187g151 at 152.358 kb on + strand, within HP15_p187g151 at 152.374 kb on + strand, within HP15_p187g151 at 152.382 kb on + strand, within HP15_p187g151 at 152.390 kb on - strand, within HP15_p187g151 at 152.406 kb on + strand, within HP15_p187g151 at 152.424 kb on - strand, within HP15_p187g151 at 152.464 kb on + strand, within HP15_p187g151 at 152.471 kb on - strand, within HP15_p187g151 at 152.547 kb on + strand, within HP15_p187g151 at 152.570 kb on + strand, within HP15_p187g151 at 152.575 kb on - strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.580 kb on + strand, within HP15_p187g151 at 152.588 kb on - strand, within HP15_p187g151 at 152.588 kb on - strand, within HP15_p187g151 at 152.592 kb on + strand, within HP15_p187g151 at 152.637 kb on + strand, within HP15_p187g151 at 152.652 kb on + strand, within HP15_p187g151 at 152.657 kb on - strand, within HP15_p187g151 at 152.657 kb on - strand, within HP15_p187g151 at 152.679 kb on - strand, within HP15_p187g151 at 152.682 kb on + strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.690 kb on - strand, within HP15_p187g151 at 152.692 kb on + strand, within HP15_p187g151 at 152.700 kb on - strand, within HP15_p187g151 at 152.712 kb on - strand, within HP15_p187g151 at 152.737 kb on - strand, within HP15_p187g151 at 152.809 kb on + strand, within HP15_p187g151 at 152.818 kb on + strand, within HP15_p187g151 at 152.846 kb on - strand, within HP15_p187g151 at 152.851 kb on - strand, within HP15_p187g151 at 152.857 kb on + strand, within HP15_p187g151 at 152.857 kb on + strand, within HP15_p187g151 at 152.865 kb on - strand, within HP15_p187g151 at 152.923 kb on + strand, within HP15_p187g151 at 152.931 kb on - strand, within HP15_p187g151 at 152.965 kb on - strand, within HP15_p187g151 at 152.991 kb on + strand at 153.019 kb on + strand at 153.027 kb on - strand at 153.027 kb on - strand at 153.027 kb on - strand at 153.131 kb on + strand at 153.131 kb on + strand at 153.131 kb on + strand at 153.139 kb on - strand at 153.159 kb on + strand at 153.167 kb on - strand at 153.219 kb on + strand at 153.219 kb on + strand at 153.227 kb on - strand at 153.227 kb on - strand at 153.227 kb on - strand at 153.266 kb on + strand at 153.280 kb on - strand at 153.280 kb on - strand at 153.300 kb on - strand at 153.300 kb on - strand at 153.325 kb on + strand at 153.333 kb on + strand at 153.355 kb on - strand at 153.444 kb on + strand at 153.456 kb on + strand at 153.468 kb on + strand at 153.469 kb on + strand at 153.482 kb on - strand at 153.500 kb on - strand, within HP15_p187g152 at 153.554 kb on + strand, within HP15_p187g152 at 153.559 kb on + strand, within HP15_p187g152 at 153.567 kb on - strand, within HP15_p187g152 at 153.599 kb on - strand, within HP15_p187g152 at 153.615 kb on + strand, within HP15_p187g152 at 153.635 kb on + strand, within HP15_p187g152 at 153.635 kb on + strand, within HP15_p187g152 at 153.673 kb on + strand, within HP15_p187g152 at 153.673 kb on + strand, within HP15_p187g152 at 153.876 kb on + strand, within HP15_p187g152 at 153.926 kb on + strand, within HP15_p187g152 at 153.983 kb on + strand, within HP15_p187g152 at 153.986 kb on - strand, within HP15_p187g152 at 153.991 kb on + strand, within HP15_p187g152 at 153.991 kb on + strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.991 kb on - strand, within HP15_p187g152 at 153.999 kb on - strand, within HP15_p187g152 at 153.999 kb on - strand, within HP15_p187g152 at 154.009 kb on + strand, within HP15_p187g152 at 154.090 kb on + strand, within HP15_p187g152 at 154.095 kb on + strand, within HP15_p187g152 at 154.098 kb on - strand, within HP15_p187g152 at 154.103 kb on - strand, within HP15_p187g152
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 150,881 - HP15_p187g150 0.47 +0.5 150,881 - HP15_p187g150 0.47 +0.4 150,892 - HP15_p187g150 0.48 -0.2 150,895 + HP15_p187g150 0.48 -0.0 150,916 - HP15_p187g150 0.50 -0.8 150,927 + HP15_p187g150 0.51 +0.5 151,055 - HP15_p187g150 0.64 +0.4 151,060 + HP15_p187g150 0.64 -0.2 151,156 - HP15_p187g150 0.73 -0.1 151,175 + HP15_p187g150 0.75 -0.3 151,178 - HP15_p187g150 0.75 -0.0 151,183 - HP15_p187g150 0.76 -0.4 151,183 - HP15_p187g150 0.76 -1.4 151,196 + HP15_p187g150 0.77 -0.4 151,196 + HP15_p187g150 0.77 +0.3 151,208 + HP15_p187g150 0.78 -0.1 151,221 - HP15_p187g150 0.80 -0.5 151,248 - HP15_p187g150 0.82 -0.1 151,396 + +0.4 151,398 - +0.6 151,401 + +1.0 151,480 + -1.7 151,544 + +0.4 151,577 + -0.0 151,589 + -0.7 151,598 - +1.1 151,607 + -0.1 151,633 + +0.6 151,633 + -3.4 151,633 + -0.0 151,641 - -0.5 151,641 - -0.3 151,641 - -0.4 151,641 - +0.6 151,712 + -1.0 151,742 + -0.0 151,750 - +0.2 151,782 - +0.8 151,813 - +0.4 151,885 - +0.1 152,072 + HP15_p187g151 0.16 -0.2 152,072 + HP15_p187g151 0.16 +0.0 152,077 + HP15_p187g151 0.17 -0.4 152,077 + HP15_p187g151 0.17 +0.6 152,077 + HP15_p187g151 0.17 +0.2 152,080 - HP15_p187g151 0.17 +0.1 152,085 - HP15_p187g151 0.17 -0.1 152,103 - HP15_p187g151 0.19 +0.3 152,187 + HP15_p187g151 0.25 +0.6 152,187 + HP15_p187g151 0.25 +1.3 152,187 + HP15_p187g151 0.25 +1.5 152,187 + HP15_p187g151 0.25 -0.5 152,187 + HP15_p187g151 0.25 +1.8 152,187 + HP15_p187g151 0.25 +0.8 152,194 - HP15_p187g151 0.26 +0.1 152,194 - HP15_p187g151 0.26 +0.0 152,195 - HP15_p187g151 0.26 +1.0 152,201 - HP15_p187g151 0.27 +0.5 152,239 - HP15_p187g151 0.30 +0.7 152,252 + HP15_p187g151 0.31 -0.4 152,252 + HP15_p187g151 0.31 -0.2 152,252 + HP15_p187g151 0.31 +0.6 152,260 - HP15_p187g151 0.31 -0.3 152,260 - HP15_p187g151 0.31 +0.5 152,260 - HP15_p187g151 0.31 -1.7 152,260 - HP15_p187g151 0.31 -0.1 152,270 - HP15_p187g151 0.32 -1.1 152,278 - HP15_p187g151 0.33 -0.2 152,278 - HP15_p187g151 0.33 +0.3 152,286 - HP15_p187g151 0.33 +0.1 152,313 + HP15_p187g151 0.36 -0.2 152,317 + HP15_p187g151 0.36 -0.1 152,358 + HP15_p187g151 0.39 +0.5 152,374 + HP15_p187g151 0.41 +0.0 152,382 + HP15_p187g151 0.41 +0.6 152,390 - HP15_p187g151 0.42 +0.8 152,406 + HP15_p187g151 0.43 +0.9 152,424 - HP15_p187g151 0.45 -0.6 152,464 + HP15_p187g151 0.48 -0.4 152,471 - HP15_p187g151 0.49 -0.5 152,547 + HP15_p187g151 0.55 +0.4 152,570 + HP15_p187g151 0.57 +1.2 152,575 - HP15_p187g151 0.57 +0.6 152,580 + HP15_p187g151 0.57 -0.1 152,580 + HP15_p187g151 0.57 -0.2 152,580 + HP15_p187g151 0.57 -0.1 152,588 - HP15_p187g151 0.58 -0.8 152,588 - HP15_p187g151 0.58 -0.4 152,592 + HP15_p187g151 0.58 +1.0 152,637 + HP15_p187g151 0.62 -0.1 152,652 + HP15_p187g151 0.63 +0.7 152,657 - HP15_p187g151 0.64 +0.7 152,657 - HP15_p187g151 0.64 +0.7 152,679 - HP15_p187g151 0.65 +0.5 152,682 + HP15_p187g151 0.66 -0.0 152,690 - HP15_p187g151 0.66 +1.3 152,690 - HP15_p187g151 0.66 +0.2 152,690 - HP15_p187g151 0.66 +0.8 152,692 + HP15_p187g151 0.67 -0.3 152,700 - HP15_p187g151 0.67 +0.2 152,712 - HP15_p187g151 0.68 +1.1 152,737 - HP15_p187g151 0.70 -0.0 152,809 + HP15_p187g151 0.76 -1.9 152,818 + HP15_p187g151 0.77 +0.4 152,846 - HP15_p187g151 0.79 +0.1 152,851 - HP15_p187g151 0.79 -0.2 152,857 + HP15_p187g151 0.80 -0.3 152,857 + HP15_p187g151 0.80 -0.6 152,865 - HP15_p187g151 0.81 +0.4 152,923 + HP15_p187g151 0.85 +0.4 152,931 - HP15_p187g151 0.86 -0.3 152,965 - HP15_p187g151 0.89 -0.2 152,991 + -0.3 153,019 + -0.8 153,027 - +0.9 153,027 - -0.4 153,027 - +0.2 153,131 + +0.1 153,131 + +0.9 153,131 + -0.3 153,139 - +0.5 153,159 + +0.4 153,167 - -0.5 153,219 + +0.0 153,219 + +0.6 153,227 - -0.0 153,227 - +0.8 153,227 - +0.7 153,266 + +0.0 153,280 - +0.4 153,280 - -0.4 153,300 - -1.7 153,300 - -1.1 153,325 + +0.6 153,333 + +0.0 153,355 - +0.6 153,444 + +0.8 153,456 + -0.3 153,468 + +1.1 153,469 + +0.1 153,482 - -0.5 153,500 - HP15_p187g152 0.11 +0.9 153,554 + HP15_p187g152 0.17 +0.4 153,559 + HP15_p187g152 0.17 +1.1 153,567 - HP15_p187g152 0.18 +0.0 153,599 - HP15_p187g152 0.22 -0.3 153,615 + HP15_p187g152 0.24 -0.4 153,635 + HP15_p187g152 0.26 +0.5 153,635 + HP15_p187g152 0.26 +0.3 153,673 + HP15_p187g152 0.30 -0.3 153,673 + HP15_p187g152 0.30 -0.3 153,876 + HP15_p187g152 0.54 +0.4 153,926 + HP15_p187g152 0.59 +0.3 153,983 + HP15_p187g152 0.66 +0.0 153,986 - HP15_p187g152 0.66 +0.1 153,991 + HP15_p187g152 0.67 +0.7 153,991 + HP15_p187g152 0.67 +0.5 153,991 - HP15_p187g152 0.67 -0.2 153,991 - HP15_p187g152 0.67 +0.0 153,991 - HP15_p187g152 0.67 +1.5 153,999 - HP15_p187g152 0.68 +0.5 153,999 - HP15_p187g152 0.68 +0.9 154,009 + HP15_p187g152 0.69 +0.1 154,090 + HP15_p187g152 0.78 +0.5 154,095 + HP15_p187g152 0.79 -1.4 154,098 - HP15_p187g152 0.79 +0.0 154,103 - HP15_p187g152 0.80 -0.8
Or see this region's nucleotide sequence