Strain Fitness in Marinobacter adhaerens HP15 around HP15_3805

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3804 and HP15_3805 are separated by 10 nucleotidesHP15_3805 and HP15_3806 are separated by 196 nucleotidesHP15_3806 and HP15_3807 overlap by 4 nucleotides HP15_3804: HP15_3804 - esterase, at 4,029,964 to 4,031,250 _3804 HP15_3805: HP15_3805 - conserved hypothetical protein, at 4,031,261 to 4,031,605 _3805 HP15_3806: HP15_3806 - conserved hypothetical protein, at 4,031,802 to 4,032,053 _3806 HP15_3807: HP15_3807 - conserved hypothetical protein, secreted, at 4,032,050 to 4,033,120 _3807 Position (kb) 4031 4032Strain fitness (log2 ratio) -1 0 1at 4030.337 kb on + strand, within HP15_3804at 4030.497 kb on + strand, within HP15_3804at 4030.505 kb on - strand, within HP15_3804at 4030.537 kb on - strand, within HP15_3804at 4030.590 kb on + strand, within HP15_3804at 4030.673 kb on + strand, within HP15_3804at 4030.717 kb on - strand, within HP15_3804at 4030.744 kb on + strand, within HP15_3804at 4030.950 kb on - strand, within HP15_3804at 4031.019 kb on - strand, within HP15_3804at 4031.059 kb on - strand, within HP15_3804at 4031.091 kb on + strand, within HP15_3804at 4031.091 kb on + strand, within HP15_3804at 4031.116 kb on + strand, within HP15_3804at 4031.175 kb on + strandat 4031.259 kb on + strandat 4031.267 kb on - strandat 4031.268 kb on + strandat 4031.276 kb on - strandat 4031.286 kb on + strandat 4031.291 kb on + strandat 4031.303 kb on + strand, within HP15_3805at 4031.303 kb on + strand, within HP15_3805at 4031.352 kb on - strand, within HP15_3805at 4031.352 kb on - strand, within HP15_3805at 4031.379 kb on + strand, within HP15_3805at 4031.382 kb on - strand, within HP15_3805at 4031.393 kb on - strand, within HP15_3805at 4031.467 kb on + strand, within HP15_3805at 4031.467 kb on + strand, within HP15_3805at 4031.512 kb on + strand, within HP15_3805at 4031.654 kb on - strandat 4031.678 kb on - strandat 4032.022 kb on + strand, within HP15_3806at 4032.022 kb on + strand, within HP15_3806at 4032.088 kb on - strandat 4032.263 kb on + strand, within HP15_3807at 4032.293 kb on - strand, within HP15_3807at 4032.303 kb on - strand, within HP15_3807at 4032.358 kb on + strand, within HP15_3807

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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4,030,337 + HP15_3804 0.29 -0.3
4,030,497 + HP15_3804 0.41 +0.0
4,030,505 - HP15_3804 0.42 +0.5
4,030,537 - HP15_3804 0.45 +0.5
4,030,590 + HP15_3804 0.49 +0.4
4,030,673 + HP15_3804 0.55 -0.0
4,030,717 - HP15_3804 0.59 +0.5
4,030,744 + HP15_3804 0.61 -0.1
4,030,950 - HP15_3804 0.77 -0.2
4,031,019 - HP15_3804 0.82 +0.2
4,031,059 - HP15_3804 0.85 +0.7
4,031,091 + HP15_3804 0.88 +0.6
4,031,091 + HP15_3804 0.88 +0.3
4,031,116 + HP15_3804 0.90 +0.0
4,031,175 + +0.5
4,031,259 + -0.3
4,031,267 - -0.3
4,031,268 + +0.6
4,031,276 - -0.3
4,031,286 + -0.1
4,031,291 + -0.0
4,031,303 + HP15_3805 0.12 -0.3
4,031,303 + HP15_3805 0.12 -0.1
4,031,352 - HP15_3805 0.26 +0.1
4,031,352 - HP15_3805 0.26 -1.6
4,031,379 + HP15_3805 0.34 -0.7
4,031,382 - HP15_3805 0.35 -0.7
4,031,393 - HP15_3805 0.38 -0.1
4,031,467 + HP15_3805 0.60 -0.1
4,031,467 + HP15_3805 0.60 -0.8
4,031,512 + HP15_3805 0.73 -0.2
4,031,654 - -0.2
4,031,678 - +0.2
4,032,022 + HP15_3806 0.87 -0.3
4,032,022 + HP15_3806 0.87 -0.1
4,032,088 - -0.3
4,032,263 + HP15_3807 0.20 -0.9
4,032,293 - HP15_3807 0.23 +0.5
4,032,303 - HP15_3807 0.24 +0.1
4,032,358 + HP15_3807 0.29 -1.4

Or see this region's nucleotide sequence