Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0060

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
60,158	-		Psest_0058	0.82	-0.9
60,185	-		Psest_0058	0.84	-0.0
60,185	-		Psest_0058	0.84	-1.0
60,191	+		Psest_0058	0.85	-0.5
60,268	+				-1.3
60,268	+				-0.7
60,269	-				+1.0
60,269	-				-0.5
60,269	-				-1.8
60,385	+				-1.5
60,541	+				-0.5
60,541	+				+1.3
60,542	-				-0.3
60,545	+				-0.6
60,576	+				-1.1
60,577	-				+2.5
60,666	+				-0.0
60,666	+				-1.9
60,667	-				+3.3
60,667	-				-1.5
60,726	-				-1.9
60,905	+		Psest_0059	0.33	+0.5
61,215	+		Psest_0060	0.32	-2.5
61,216	-		Psest_0060	0.33	-1.2
61,290	-		Psest_0060	0.73	-0.0
61,416	+				+0.5
61,417	-				-2.0
61,530	+		Psest_0061	0.22	+0.5
61,530	+		Psest_0061	0.22	+0.8
61,530	+		Psest_0061	0.22	+2.1
61,531	-		Psest_0061	0.22	+0.7
61,641	+		Psest_0061	0.56	-0.1
61,653	+		Psest_0061	0.59	+0.2
61,896	+				+1.5
61,897	-				-0.3
61,900	+				+0.7
61,900	+				-1.3
61,900	+				+1.5
61,901	-				-1.5
61,901	-				-2.5
61,901	-				+1.8
61,901	-				-1.0
61,901	-				+1.3
61,980	+				-0.6
61,980	+				+0.8
61,981	-				-2.4
62,245	+		Psest_0062	0.35	+0.4
62,245	+		Psest_0062	0.35	-0.3
62,245	+		Psest_0062	0.35	-1.9
62,245	+		Psest_0062	0.35	+0.8
62,246	-		Psest_0062	0.35	-1.0
62,246	-		Psest_0062	0.35	-0.3
62,246	-		Psest_0062	0.35	-1.5
62,246	-		Psest_0062	0.35	-2.2
62,246	-		Psest_0062	0.35	-0.6
62,248	+		Psest_0062	0.35	+0.3
62,249	-		Psest_0062	0.35	+3.5
62,249	-		Psest_0062	0.35	+3.1
62,249	-		Psest_0062	0.35	+0.4